Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00195 ATGGCTGCCAAACGGTTTTTGGATGATTCTGATCAAGATAACAATGGTGATAAACGGATGAGACCTACAACAAGACCTTCTTTTGCCTCGGTAATAGGAGAAGTCGTCATGGTGAAGAACCTGCAGAACCTTTTCTCGGGCTTGGAACCCTTGCTTAGGAGAGTGGTGAACGAAGAGATGGAGCGAGTGATCGGGCATTGTGTTCCGCGTTCAATGACCAGGTCCCCTTCGTTGAGGATCCAAGCATTGGAGCAACCAACAAGCTACGAACTCATGTTCGAGAAGAAGCTAATGCCAACTATATTCACAGGAAGCAGAATCGTAGACACAGATGGGAACCCCCTCCTTGTTGTTCTTGTTGACAAAAACGATGGTCAAACGGTTCGCACGAGTCTCCCCCACCCCATCAAGCTAGAAATCGTGGTGCTTGATGGGGATTTTCCTTCTAACAGTGATAACAACGAGTCATGGACGAGTGAGGAATTCAACAACCGCATAGTGAAGGAGAGAACGGGAAAGCGACCGTTGCTCACCGGAGAATTGAATCTCACCATGAGGGATGGAATTGCACCGATTGAAGACATTGAATTCACTGATAATTCCAGTTGGATAAGAAGCAGAAAGTTCAGAGTTGCTGTTCGAGTTGCTCCCGGGACTAATCAAACTGTTAGAATTCGTGAAGGCATGACTGAACCATTTATCGTCAGGGATCACCGTGGTGAATTGTACAAGAAACATCACCCACCTATGCTGAATGACGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGACGGAGCTTTCCACAAAAAACTGTCCAAAGAGGGAATAAACAGTGTGCAAGACTTTCTCAAGTTGTCTGTTGTTGATGCCCAGAGGCTCAGAAGGATTTTGGGCGCTGGAATGTCAGAGAGAATGTGGGATGTGACAATCAAACATGCAAAGACCTGTGAGAAGGGTAACAAATATTATGTCTTCCGTGGCCCAAATTTTACCATCTTTCTCAATTCCATTTGCCAATTGGTTAAAGCTGATATTAATGGCCAAAGTTTTCCGGGAAGCGAGTTAAGCAGCTTCACAAAGAGCTATATGGAAAGATTGGTGAGAGAAGCGTATACCAGATGGAATGACCTGGAGGAAATTGATGGGGCTCTGTTAACCCAAGGTGAGAGCATGGAGCAAATTCCAAACAATCTTCAAGCATCAGCAAGTGTAGCATATGATCAGAATGAGTACTATGCATCAACCCATAATGCACAAATTGGGGGCGGCGAGTGGGGTGTGAATGCAACATTTGGCACAACATCGTTTGTGAATAACGCCCTTCCAGCTTTACCTTACAGCTTCTCAGATTCACAATCTGACAGTGATGGTGCCACCAGGTGGAACTAG 1389 0.4564 MAAKRFLDDSDQDNNGDKRMRPTTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEMERVIGHCVPRSMTRSPSLRIQALEQPTSYELMFEKKLMPTIFTGSRIVDTDGNPLLVVLVDKNDGQTVRTSLPHPIKLEIVVLDGDFPSNSDNNESWTSEEFNNRIVKERTGKRPLLTGELNLTMRDGIAPIEDIEFTDNSSWIRSRKFRVAVRVAPGTNQTVRIREGMTEPFIVRDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSKEGINSVQDFLKLSVVDAQRLRRILGAGMSERMWDVTIKHAKTCEKGNKYYVFRGPNFTIFLNSICQLVKADINGQSFPGSELSSFTKSYMERLVREAYTRWNDLEEIDGALLTQGESMEQIPNNLQASASVAYDQNEYYASTHNAQIGGGEWGVNATFGTTSFVNNALPALPYSFSDSQSDSDGATRWN 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00195 462 PANTHER OS02G0177800 PROTEIN 1 452 IPR012416 GO:0005516
Viun3g00195 462 MobiDBLite consensus disorder prediction 1 20 - -
Viun3g00195 462 MobiDBLite consensus disorder prediction 1 25 - -
Viun3g00195 462 Pfam Calmodulin binding protein-like N-terminal domain 89 238 IPR046831 -
Viun3g00195 462 Pfam Calmodulin binding protein central domain 250 316 IPR046830 -
Viun3g00195 462 Pfam Calmodulin binding protein C-terminal domain 321 380 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00195 Viun-Chr3 1078018 1081500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00195 3 420 Calmodulin-binding Proteins AT5G57580 45.305 8.87e-121 365