Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00134 ATGGCAGAGAGTTCTTCATCATTCGCTGTGTCCACCTCTCCCACTAGGCATGATGTGTTTCTGAGCTTCAGAGGGGAAGACACGCGTGACAACTTCATTAGTCACCTTTATGCAGCGCTGAAGAGGAAGAACATTGAAACATACATTGATTACAGACTACAGAGGGGCGAAGAAATTTCACCTGCACTGGAAACTGCCATAGAAGAATCAAAGATTTATGTCATTATTTTCTCTGAAAACTATGCATCTTCCACTTGGTGTTTGAATGAGCTCACTAAGATACTGGACTGCAAGAAGAGATATGGAAGATATGTGATACCCGTTTTCTACAAGGTGGATCCATCAACTATTAGGAAGCAGAAAGAGAGATACAAAGAAGCATTCGAAGAGCATGAACATCGGTTTAAGGAGGACATGGAGAAAGTGCAAGGATGGAAGGATGCTCTAACCGAAGCTGCTGGACTCTCAGGCTGGGATTCAAAAGTCACCAGGCCAGAATATACACTTGTTGAAGAAATTGTGAAAGATATTTTGAGAAAACTGATCAATCGTTGTTCCATTAGTTATGATCAAGGAATCATCGGCATTGAAAAACATATTGAAGCAATTCGGTGTTTGTTGCATCTTGAGTCACCGTATCTTCGGATTATAGGAATTTGTGGCATGGGAGGAATAGGAAAAACTACAATCTCTGAGCAAATATATCACACATTGGCGGTGCACTTTGATTCCAGAAGCCTTGTTTTAGACGTTCAAGAAAAACTACAAAGAGATGGAATAGACAGTATCAGAATAAAATATATGTCTGAGCTTCTAAATGAAGCACCATCCCCTCTTTTATTATACTACAAGGAAAGGCTTAAACGGACAAGGGTTCTCCTCATTCTTGATGATGTTACTGATTCAGCTCAACTTGAAAAATTACTACGAGGGTGTGATAGTTTTGGGCAGGGCAGTAGAATCATTATGACCGGTAGAAACAAACAAGTGCTTAAAAATGTTGGAGCTGATGATGTCTACGAACTTAAGGGGTTGAATTTTCATGATTCTCTAAAACTTTTTAGTTTACATGCTTTTAAACAAAATTCTTTACGAGAAATCACTTACATGGACTTGTCAGTAAAGGTGTTGAGATATGCAAAAGGGATTCCGTTAGCTCTTCAGATTTTGGGCTCATTGCTTTATGACAAACCAAGAGAAGCATGGGAAAGTCAGTTGCAAAAGTTGGAAAGGTGTCAGGATCTTAAAATTTTCAATGTATTAAAATTGAGTTATGATGAGCTTGATGAGGAGCAGAAGAATATATTTCTTGACATAGCTTGCTTTTATAGAGGACATGAGGAGACTGTGGTAGCAGAAACACTAGATGACTGTGGTTTCTCTTCTAAGATTGAAATGGATGTTCTCAAAGATAGGTGCCTAATATCTGTCTTGGATGGTAGAATTGTGATGCATGATCTAATACAAGAAATGGGTCAAGAGATTGTTCGCAAAGAGTGTCCTCAGCATCCTGGTAAACGTAGTCGATTGTTGAAGGTTGAGGAGATTAGTGAGGTTTTAAGAAATAACAAGGGGTCCGAAGCACTACAGAGTATAGTAGCAGATATGAGAAAAATGGAAGAAGTTGAAGTACATGCACAATGTTTCGAAATGATTAAGAATCTTAGGATGCTTATGCTCTATTATTCTAGGTTTAGAAATGAATCAAATGTGTTTCGTGAATCATCTCTCATAATTCTGCCAGAGACTTTAAAGATTCTTTATTGGACCGGTTTCCCTCAAAGATCTTTGCCACCGAACTTTTGTCCCCAAAATCTAGTGAGACTCGAAATGATAGGCAGCCATCTGGAACAACTATGGGAAGGAGATCAGTATTTACCGAAGTTGAAAAGGCTCAACCTGAGTGGTTCTCTGAAACTCACTAGAATACCAGACCTTTCTCTGTCACCAAATATTGAAGAAATAATTCTCAGTAGCTGTGAGAAGTTGATTAATGTTCATTCTTCCAAATTACTCAGCAGGCTCACTTGTTTATGTTTAGATAATTGTTATGATCTGAAGTGTGTAACTGTTCCCAGCAATATTCTATCCACATCACCAGGATTGATTCTTCTTTCCCATTGTCACGAGCTTGAAATTTTTAAAACAGTTGAAACTCAATTATGCGATTTACCGTCATTATCATCAAGCCGTCTAAGATGCAATTGTGCTTTGTATGGTAAGGCACTTCGCTCAAGACTCCATCACAGTGAAATTTTCTCAATTACTTTTGACAGATATAAGGAAGAAGAAGTGGCTAATAATGACATATGCTTACAATGCGATGGAGTGTCGAGGAAACTCACAGAAGGTGTGCCCTTAGACTTTCAAAGTCTCAAGAAGCTCTGTTGCTTAGATCTCTCAGGCTGTTCTTCCCTTAAAATCTTTCCATTTAACCTTTCTGAGATGAAATTTCTAAGGCAACTTTGTCTCCGTCGTTGCTCAAAATTGGAAAATTTCCCCGAGATTCAGGACACGATGGAAGATCTAACGGTGCTCATCTTAGACAGAACAGCCATACAGGCACTACCTTCGTCCTTGTGGCGTTTGGTAGGGCTTCAAGAACTGAGTTTGTGCACGTGCAGGAATCTTGAGATTATTCCATCTTCCATTGGAAGCCTCACCAGACTATGCAAGTTAGACCTTTCCTACTGTGATTCACTTCAAACTTTTCCAAGCACCATTTTCAAATTGAAGTTGAGGAAACTTGATTTGTGTTGTTGCTTTAAGTTCAGGACCTTCCCAGAGATCACGGAGTCGGCACAAACTTTTGCTCACATTAACTTAACAAATACGGCTGTTAAAGAACTCCCTTCCTCATTTGGCAATTTGGCTAATCTTCGATCCCTGCAACTCAACCGGTGCACTAATCTCGAGTCACTTCCAAACTCCATTGTTAATCTAAAACATCTCTGTAAACTTGATTGTTCGGGGTGTGCCAAATTAACAGAAATCCCAACACACATTGGTCTTCTGTCGTCATTAATGGAACTGTCACTGAGTGTGACCGGAATCGTGAACCTTCCCAAGAGCATTGTTCATCTTTCGAGCTTGAAATCACTTGATTTAACTGGCTGCAAAAATCTTGAATGCATCCCACAGATTCCACCATTTCTAAAACAACTGGTGGCATTGGATTGCCCATCCATTAGACAAGTGATGTCAAATTCTCTTGCTCGAAACATCTCAAATTCCAAAGAGAGTGTCTTCAAATTTTACTTGACCAATGCTCAACAACTGGATTCAGGTGCTCGTGCTAACATTGAGGAGGATGCAAGGCTTATGATGACAGACGATGCCTATAAGTCTGCGTGCTTCTGTTTTCCAGGGAGTGAAGTTCCTAATTGGTTCCCTTTTCGCAGCGAGGGAGCTTCAGTGACTATAAATGAGGATTTAAGTTTCTGCAGCGATGACAGGCTCATTGGTTTCGCTTTGTGTGTGGTTTTTGGAGTGTTAGATACCAATGATATTGAAGGTAGACGTGGTTCTTTTGGTTACAACCTAAAATTTGAATCTGATGATGATGGCACGCAGATTATTCCAAATAACGATGTGTTAAAGAACTATTTCGAATGGAATTATGAAGACAAAGTCGTTGATAAAGATCGCACATTCATGTGGAAATTTAAGTTGGAGTCCCTAAGGAGGAGTGGCATGAGGCTTAGGCTCTGTGATGCTCGCAGCTTCACTTTTGAGATCAGTCGGAATGATTATGACTTTGAGCAACCAGATTACGAATCAGTTGTGGGAGAGTTCAAATCAGTTCTCACGATAAAAGAATGCGGCATTTGTCCTCTTTATAGCAACGGAAGTAATGTTTCACAGTCTTCAAGGACATATAGGAAGAGGCAGAAGGCCGAAAGCTACCTAGTCAGCTAG 3918 0.3987 MAESSSSFAVSTSPTRHDVFLSFRGEDTRDNFISHLYAALKRKNIETYIDYRLQRGEEISPALETAIEESKIYVIIFSENYASSTWCLNELTKILDCKKRYGRYVIPVFYKVDPSTIRKQKERYKEAFEEHEHRFKEDMEKVQGWKDALTEAAGLSGWDSKVTRPEYTLVEEIVKDILRKLINRCSISYDQGIIGIEKHIEAIRCLLHLESPYLRIIGICGMGGIGKTTISEQIYHTLAVHFDSRSLVLDVQEKLQRDGIDSIRIKYMSELLNEAPSPLLLYYKERLKRTRVLLILDDVTDSAQLEKLLRGCDSFGQGSRIIMTGRNKQVLKNVGADDVYELKGLNFHDSLKLFSLHAFKQNSLREITYMDLSVKVLRYAKGIPLALQILGSLLYDKPREAWESQLQKLERCQDLKIFNVLKLSYDELDEEQKNIFLDIACFYRGHEETVVAETLDDCGFSSKIEMDVLKDRCLISVLDGRIVMHDLIQEMGQEIVRKECPQHPGKRSRLLKVEEISEVLRNNKGSEALQSIVADMRKMEEVEVHAQCFEMIKNLRMLMLYYSRFRNESNVFRESSLIILPETLKILYWTGFPQRSLPPNFCPQNLVRLEMIGSHLEQLWEGDQYLPKLKRLNLSGSLKLTRIPDLSLSPNIEEIILSSCEKLINVHSSKLLSRLTCLCLDNCYDLKCVTVPSNILSTSPGLILLSHCHELEIFKTVETQLCDLPSLSSSRLRCNCALYGKALRSRLHHSEIFSITFDRYKEEEVANNDICLQCDGVSRKLTEGVPLDFQSLKKLCCLDLSGCSSLKIFPFNLSEMKFLRQLCLRRCSKLENFPEIQDTMEDLTVLILDRTAIQALPSSLWRLVGLQELSLCTCRNLEIIPSSIGSLTRLCKLDLSYCDSLQTFPSTIFKLKLRKLDLCCCFKFRTFPEITESAQTFAHINLTNTAVKELPSSFGNLANLRSLQLNRCTNLESLPNSIVNLKHLCKLDCSGCAKLTEIPTHIGLLSSLMELSLSVTGIVNLPKSIVHLSSLKSLDLTGCKNLECIPQIPPFLKQLVALDCPSIRQVMSNSLARNISNSKESVFKFYLTNAQQLDSGARANIEEDARLMMTDDAYKSACFCFPGSEVPNWFPFRSEGASVTINEDLSFCSDDRLIGFALCVVFGVLDTNDIEGRRGSFGYNLKFESDDDGTQIIPNNDVLKNYFEWNYEDKVVDKDRTFMWKFKLESLRRSGMRLRLCDARSFTFEISRNDYDFEQPDYESVVGEFKSVLTIKECGICPLYSNGSNVSQSSRTYRKRQKAESYLVS 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00134 1305 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 183 - -
Viun3g00134 1305 Pfam NB-ARC domain 197 413 IPR002182 GO:0043531
Viun3g00134 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 439 IPR027417 -
Viun3g00134 1305 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 158 IPR035897 -
Viun3g00134 1305 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 712 IPR044974 GO:0006952
Viun3g00134 1305 Pfam TIR domain 17 181 IPR000157 GO:0007165
Viun3g00134 1305 Gene3D - 345 429 IPR042197 -
Viun3g00134 1305 Gene3D - 14 186 IPR035897 -
Viun3g00134 1305 Gene3D - 187 340 IPR027417 -
Viun3g00134 1305 ProSiteProfiles TIR domain profile. 15 181 IPR000157 GO:0007165
Viun3g00134 1305 SUPERFAMILY L domain-like 781 1062 - -
Viun3g00134 1305 Gene3D Ribonuclease Inhibitor 508 770 IPR032675 -
Viun3g00134 1305 PRINTS Disease resistance protein signature 216 231 - -
Viun3g00134 1305 PRINTS Disease resistance protein signature 380 394 - -
Viun3g00134 1305 PRINTS Disease resistance protein signature 1026 1042 - -
Viun3g00134 1305 PRINTS Disease resistance protein signature 286 300 - -
Viun3g00134 1305 Gene3D Ribonuclease Inhibitor 777 931 IPR032675 -
Viun3g00134 1305 SMART till_3 16 155 IPR000157 GO:0007165
Viun3g00134 1305 Pfam C-JID domain 1121 1282 IPR045344 -
Viun3g00134 1305 Gene3D Ribonuclease Inhibitor 932 1059 IPR032675 -
Viun3g00134 1305 Pfam Leucine Rich Repeat 605 624 IPR011713 -
Viun3g00134 1305 SUPERFAMILY L domain-like 483 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00134 Viun-Chr3 668837 674036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00134 12 875 WRKY Transcription Factor Family AT4G12020 30.647 3.36e-97 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00134 - - vun:114178119 2001.87