Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00076 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGATGATGCACAGGGGGCTACTTCATCAAAGAGCACCAAGTCCAGTGACGGTTCATCTTCGTCCACTGCCCCTAAGAAGCTTTCCAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAATCTGGCCAGAGGAGAAAGAATGGAGCCATCTGATTCAGTGAGCAGTGGTGGTTTAGATGTTGTGTCTGATTCAGCAAGGCGTGATTCGGAGTCTAGCGCGTCTAGGGATCCTGAAGTGGAAGAGGAATATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGACCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCAGAAGTTGTGGCCTACCGGTACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGACGGTTTCTATGATCTGTATGGGATATTGACTGAGTCAACCTCTGCAAGAATGCCTTCTCTAGTAGATCTGCAAGGAAAATCAACCTCAGTTGATGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCCAACTTGTTGAAACTTGAACAAGAAGCCATGAAGATGGCTGCCAGTTCAGGAAAAGATTTTGAAGTAGTTGTAAATAGCAATTTGGTACACAAGCTTGCAATAATGGTGGCTGACTATATGGGTGGATCAGTTAAAGATCCTGAAAGCATGTCTAGAGCCTGGAGGAGTCTTAGTTACAGTCTAAAAGCCACACTTGGCAGCATGGTTTTGCCTCTTGGTTCACTGACCATTGGATTGGCTCGGCATCGCGCATTGTTATTCAAGGTTTTAGCTGACAGTTTGGGCATTCCGTGTCGATTAGTGAAAGGACTGCAGTACATGGGTTCTGATGATGTAGCTATGAACTTTGTCAAAATTGATGATGGAAGGGAGTACATTGTGGACCTAATGGCAGCTCCTGGAGCACTTATTCCATCTGATGCTACTGCATCACACATTGAATGCGATGGATCTTCCTTTGTGGCCAGTCCTTCATCAAGAGAGCTAGATTCGTCCAATGTAGCATCATTCAGTAGCGGGGTTGGAAGTTCATCTGAAGAAACTTCAGACTGTGGAGGGAAAGAATCTGGTTTGAGTGGGCTTGCTACTGGCAAGGAAGATTTAAAGAAACCATCAAATGAATCCAAAAATACCCCCTATGCAGAGAAGACAAGAGTGAAGGAATCTTCCAGCAGAGCTAATTATCCATACATGCATGGAAGATCTCCTTCTTGGACTGAGGGCATCAGTTCCCCTGCAGCACGTAGAATGAAAGTCAAAGATGTTTCCCAATACATGATTGATGCTGCTAAGGAAAATCCTAACTTGGCTCAAAAACTTCATGACGTTTTACTTGAAAGCGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATGTATCATGGGCAGTTAGGTACTCCAACTGGGACCAATTTTCCAACTGAACAAAAAGATGAAAATAAACAAGCAAGTTGCCAGCAAGAAATTAAGACTGATGACAGCCTAGTTCCTGCTCGATTTTTGCCTCCTTTGCCTTACCACAAAATTCTTCGCAAAGCAACTCTTGGCAGTGGTGATGGCTTAGGAATTGGTCTTTCCCTTGATACAGGGGAAACTACTGGACAGAACATACCATCTCAGGCAGAAGCAGCTCGGGTAAAGTATGGGAAAAATGTCCCAGTGGCAGCGGCTGCAGCTGCTGCTGCGGCTGTTGTTGCATCTTCTATGGTAGTTGCGGTGACAAAATCAAACACTGACTCAAATCTTGAGATTCCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAGTAAGTATGAGCAGGACAGTCGAAGCGATGGGGATACAGAGGGTGGTGGTTCTGAGTCAAAGGGTAGTGGTGATGGAGAGCCTAATGCTTTAGGAGAAAACTCAGAAGGTGAGAGAAAATCTGACAGATCAGTAAGTAATGACAGCACAAAATCTGATTCTGCACTGGATGAGGTTGCCGAGTATGACATTCCATGGGATGAAATCAAAATGGGAGAGCGTATTGGACTAGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCCGTAAAGAAGTTCTTATATCAAGATATCTCTGGTGAATTACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGGCCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGGCTGGTAACGTAA 2388 0.4435 MKNILKKLHIMSNQSDDAQGATSSKSTKSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPSPNLARGERMEPSDSVSSGGLDVVSDSARRDSESSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGKSTSVDVTWEAVLVNRAADSNLLKLEQEAMKMAASSGKDFEVVVNSNLVHKLAIMVADYMGGSVKDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSDDVAMNFVKIDDGREYIVDLMAAPGALIPSDATASHIECDGSSFVASPSSRELDSSNVASFSSGVGSSSEETSDCGGKESGLSGLATGKEDLKKPSNESKNTPYAEKTRVKESSSRANYPYMHGRSPSWTEGISSPAARRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEMYHGQLGTPTGTNFPTEQKDENKQASCQQEIKTDDSLVPARFLPPLPYHKILRKATLGSGDGLGIGLSLDTGETTGQNIPSQAEAARVKYGKNVPVAAAAAAAAAVVASSMVVAVTKSNTDSNLEIPVAAAATATAAAVVATTAAVSKYEQDSRSDGDTEGGGSESKGSGDGEPNALGENSEGERKSDRSVSNDSTKSDSALDEVAEYDIPWDEIKMGERIGLGSYGEVYRGEWHGTEVAVKKFLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRLVT 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00076 795 MobiDBLite consensus disorder prediction 84 102 - -
Viun3g00076 795 Gene3D Phosphorylase Kinase; domain 1 706 790 - -
Viun3g00076 795 ProSiteProfiles Protein kinase domain profile. 713 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g00076 795 MobiDBLite consensus disorder prediction 676 691 - -
Viun3g00076 795 FunFam Serine/threonine-protein kinase isoform 1 704 791 - -
Viun3g00076 795 SUPERFAMILY Protein kinase-like (PK-like) 699 792 IPR011009 -
Viun3g00076 795 MobiDBLite consensus disorder prediction 645 700 - -
Viun3g00076 795 MobiDBLite consensus disorder prediction 1 102 - -
Viun3g00076 795 MobiDBLite consensus disorder prediction 372 439 - -
Viun3g00076 795 ProSitePatterns Protein kinases ATP-binding region signature. 719 741 IPR017441 GO:0005524
Viun3g00076 795 MobiDBLite consensus disorder prediction 8 60 - -
Viun3g00076 795 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 38 236 - -
Viun3g00076 795 MobiDBLite consensus disorder prediction 372 392 - -
Viun3g00076 795 Pfam Ethylene-responsive protein kinase Le-CTR1 141 344 - -
Viun3g00076 795 Pfam Protein tyrosine and serine/threonine kinase 713 791 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00076 Viun-Chr3 328411 334723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00076 1 792 MAP Kinase Kinase Kinase AT1G73660 57.869 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun3g00076 EDR1 2e-76 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00076 - - gmx:100778331 1242.64