Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00074 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGATGATGCACAGGGGGCTACTTCATCAAAGAGCACCAAGTCCAGTGACGGTTCATCTTCGTCCACTGCCCCTAAGAAGCTTTCCAATTGGTTGCATTCAGTTTCTAATAGGCAGAGTCCCAGTCCTCCATCTCCCAATCTGGCCAGAGGAGAAAGAATGGAGCCATCTGATTCAGTGAGCAGTGGTGGTTTAGATGTTGTGTCTGATTCAGCAAGGCGTGATTCGGAGTCTAGCGCGTCTAGGGATCCTGAAGTGGAAGAGGAATATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGACCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCAGAAGTTGTGGCCTACCGGTACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTCAGACGGTTTCTATGATCTGTATGGGATATTGACTGAGTCAACCTCTGCAAGAATGCCTTCTCTAGTAGATCTGCAAGGAAAATCAACCTCAGTTGATGTCACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCCAACTTGTTGAAACTTGAACAAGAAGCCATGAAGATGGCTGCCAGTTCAGGAAAAGATTTTGAAGTAGTTGTAAATAGCAATTTGGTACACAAGCTTGCAATAATGGTGGCTGACTATATGGGTGGATCAGTTAAAGATCCTGAAAGCATGTCTAGAGCCTGGAGGAGTCTTAGTTACAGTCTAAAAGCCACACTTGGCAGCATGGTTTTGCCTCTTGGTTCACTGACCATTGGATTGGCTCGGCATCGCGCATTGTTATTCAAGGTTTTAGCTGACAGTTTGGGCATTCCGTGTCGATTAGTGAAAGGACTGCAGTACATGGGTTCTGATGATGTAGCTATGAACTTTGTCAAAATTGATGATGGAAGGGAGTACATTGTGGACCTAATGGCAGCTCCTGGAGCACTTATTCCATCTGATGCTACTGCATCACACATTGAATGCGATGGATCTTCCTTTGTGGCCAGTCCTTCATCAAGAGAGCTAGATTCGTCCAATGTAGCATCATTCAGTAGCGGGGTTGGAAGTTCATCTGAAGAAACTTCAGACTGTGGAGGGAAAGAATCTGGTTTGAGTGGGCTTGCTACTGGCAAGGAAGATTTAAAGAAACCATCAAATGAATCCAAAAATACCCCCTATGCAGAGAAGACAAGAGTGAAGGAATCTTCCAGCAGAGCTAATTATCCATACATGCATGGAAGATCTCCTTCTTGGACTGAGGGCATCAGTTCCCCTGCAGCACGTAGAATGAAAGTCAAAGATGTTTCCCAATACATGATTGATGCTGCTAAGGAAAATCCTAACTTGGCTCAAAAACTTCATGACGTTTTACTTGAAAGCGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATGTATCATGGGCAGTTAGGTACTCCAACTGGGACCAATTTTCCAACTGAACAAAAAGATGAAAATAAACAAGCAAGTTGCCAGCAAGAAATTAAGACTGATGACAGCCTAGTTCCTGCTCGATTTTTGCCTCCTTTGCCTTACCACAAAATTCTTCGCAAAGCAACTCTTGGCAGTGGTGATGGCTTAGGAATTGGTCTTTCCCTTGATACAGGGGAAACTACTGGACAGAACATACCATCTCAGGCAGAAGCAGCTCGGGTAAAGTATGGGAAAAATGTCCCAGTGGCAGCGGCTGCAGCTGCTGCTGCGGCTGTTGTTGCATCTTCTATGGTAGTTGCGGTGACAAAATCAAACACTGACTCAAATCTTGAGATTCCTGTAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAGTAAGTATGAGCAGGACAGTCGAAGCGATGGGGATACAGAGGGTGGTGGTTCTGAGTCAAAGGGTAGTGGTGATGGAGAGCCTAATGCTTTAGGAGAAAACTCAGAAGGTGAGAGAAAATCTGACAGATCAGTAAGTAATGACAGCACAAAATCTGATTCTGCACTGGATGAGGTTGCCGAGTATGACATTCCATGGGATGAAATCAAAATGGGAGAGCGTATTGGACTAGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCCGTAAAGAAGTTCTTATATCAAGATATCTCTGGTGAATTACTTGAAGAGTTCAAAAGTGAGGTCCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGGCCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCAAACAATCAATTAGATGAGCGAAGGCGGTTGCGGATGGCCCTTGATGCTGCCCGAGGAATGAACTACCTGCACAGCAGTACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTGAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGCACCTTCCTTTCTTCCAGATCAACTGCGGGAACAGCTGAATGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGCGACGTTTTCAGCTATGGCGTCATATTGTGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCAGTGGGTTTCCAACATCGCCGTCTAGACATTCCAGATGATGTAGACCCTGCCATTGCTGATATTATCAGACAATGCTGGCAGACAGATCCAAAGTTGAGGCCCACATTTGCTGAAATCATGGCTGCTCTGAAGCCATTGCAGAGGCCAATTACTGCTTCTCAAGTGCCTAGATCAAGTGCTCAGTCATCTAGAGTTGCTGAGTTTCCCGCAGGATAG 2982 0.448 MKNILKKLHIMSNQSDDAQGATSSKSTKSSDGSSSSTAPKKLSNWLHSVSNRQSPSPPSPNLARGERMEPSDSVSSGGLDVVSDSARRDSESSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGKSTSVDVTWEAVLVNRAADSNLLKLEQEAMKMAASSGKDFEVVVNSNLVHKLAIMVADYMGGSVKDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSDDVAMNFVKIDDGREYIVDLMAAPGALIPSDATASHIECDGSSFVASPSSRELDSSNVASFSSGVGSSSEETSDCGGKESGLSGLATGKEDLKKPSNESKNTPYAEKTRVKESSSRANYPYMHGRSPSWTEGISSPAARRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEMYHGQLGTPTGTNFPTEQKDENKQASCQQEIKTDDSLVPARFLPPLPYHKILRKATLGSGDGLGIGLSLDTGETTGQNIPSQAEAARVKYGKNVPVAAAAAAAAAVVASSMVVAVTKSNTDSNLEIPVAAAATATAAAVVATTAAVSKYEQDSRSDGDTEGGGSESKGSGDGEPNALGENSEGERKSDRSVSNDSTKSDSALDEVAEYDIPWDEIKMGERIGLGSYGEVYRGEWHGTEVAVKKFLYQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHSSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAIADIIRQCWQTDPKLRPTFAEIMAALKPLQRPITASQVPRSSAQSSRVAEFPAG 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00074 993 Pfam Protein tyrosine and serine/threonine kinase 713 965 IPR001245 GO:0004672|GO:0006468
Viun3g00074 993 FunFam Serine/threonine-protein kinase isoform 1 704 791 - -
Viun3g00074 993 MobiDBLite consensus disorder prediction 676 691 - -
Viun3g00074 993 Pfam Ethylene-responsive protein kinase Le-CTR1 141 344 - -
Viun3g00074 993 SMART serkin_6 713 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g00074 993 ProSiteProfiles Protein kinase domain profile. 713 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun3g00074 993 MobiDBLite consensus disorder prediction 372 439 - -
Viun3g00074 993 ProSitePatterns Protein kinases ATP-binding region signature. 719 741 IPR017441 GO:0005524
Viun3g00074 993 FunFam Serine/threonine-protein kinase CTR1 792 975 - -
Viun3g00074 993 MobiDBLite consensus disorder prediction 974 993 - -
Viun3g00074 993 MobiDBLite consensus disorder prediction 8 60 - -
Viun3g00074 993 Gene3D Phosphorylase Kinase; domain 1 706 790 - -
Viun3g00074 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Viun3g00074 993 MobiDBLite consensus disorder prediction 372 392 - -
Viun3g00074 993 MobiDBLite consensus disorder prediction 84 102 - -
Viun3g00074 993 Gene3D Transferase(Phosphotransferase) domain 1 792 976 - -
Viun3g00074 993 SUPERFAMILY Protein kinase-like (PK-like) 699 964 IPR011009 -
Viun3g00074 993 MobiDBLite consensus disorder prediction 645 700 - -
Viun3g00074 993 MobiDBLite consensus disorder prediction 1 102 - -
Viun3g00074 993 PRINTS Tyrosine kinase catalytic domain signature 826 844 IPR001245 GO:0004672|GO:0006468
Viun3g00074 993 PRINTS Tyrosine kinase catalytic domain signature 936 958 IPR001245 GO:0004672|GO:0006468
Viun3g00074 993 PRINTS Tyrosine kinase catalytic domain signature 892 914 IPR001245 GO:0004672|GO:0006468
Viun3g00074 993 PRINTS Tyrosine kinase catalytic domain signature 787 800 IPR001245 GO:0004672|GO:0006468
Viun3g00074 993 PRINTS Tyrosine kinase catalytic domain signature 873 883 IPR001245 GO:0004672|GO:0006468
Viun3g00074 993 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 77 974 - -
Viun3g00074 993 CDD STKc_MAP3K-like 719 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00074 Viun-Chr3 325682 334714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00074 1 985 MAP Kinase Kinase Kinase AT1G73660 63.314 0.0 1137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Viun3g00074 PK_Tyr_Ser-Thr 4.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00074 - - gmx:100778331 1612.05