Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00068 ATGGAGACGTGGAAAATAGCGCAGCCAATTCTGGTAATGGTGATGATGCAGATAGCAAATGCATGGGTGAATATTCTCTACGAACTTGCTCTAAAGGATGGTATGAATTGTAGTATCATTGTTGCTTACCGATATGTTTTCGCAACCGTTTTCATTTCTCCGCTTGCTCTCATCATTGAAAGGAATAAGAGATCAAATATGACTTGGATGATACTCTTTCATGCATTTCTGGGTGGTTTGATTGGCGGAACAGTTGCTCAAAACTTAAGCGTTGAATCAATTACTTTAACATCTGCGACGTTTACAACCGCCATGTCCAACCTCGGTCCGGGCATTACCTTTATCGTCTTACTCTGCTTTCGATTGGAAAAATTAAATTTAATAACAAGAGGGGGAAAGATGAAGATAATTGGAACGATAATCGGAATTAGTGGAGCAACGATTATGACTTTCATTAAAGGCCCAGAAATTAAGCTAACGACGTGGTTCCATGTCCACCGAAACGACCACAACGTTCTGCAGAGAGACACTATTTCTGGCTCTAAGAACATATTAGGTGCTCTTGCCTCACTCGGAACCCAAGTCTCTAATGCACTCTGGCTAATCAATCAGACAAAACTTACTGAAAGGTACCCTTATCCTTATTCAAGCACAGCATTGGTGACCCTAATGGGAGCACTGTTATCACTTTCGTTTGCATTTTGCGTTGAAAGGGATTTGAGTGAGTGGAGATTGGGTTGGAATGTAAGACTATTCACCGTGGCTTATTCGGGTACAGTGACTTCTGGAGTGATGTATGTTGCCTATTCGTGGTGTCTACGCAGAAAAGGTCCTTTGTTTGTTTCCATTTTTAGCCCTCTCATGCTTGTGATTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAGCTATACCTAGGAAGGCCGGCTCGGAAGGAGCTCTCTCCCGGAAGAGCCCCCTCCTCTCCCCTAAACCCTAAACCTCTCCCCTCCTCCAGAGCTCTCCATCCCGGAAGATCTCCCTTCGGGAGAGTCAGAACCCTCCCTCGGATTCCATCTCGGGAGGAGTCCTCTCCCGTCCTGGGAGGAGAGTCCCGAGACAGCTCTTCCGGGAGGAGAGTCCCGCCCTCTCTCGACCCCCCGAGAGAGCCAGAGCCCCCAGGAGAGCCAAATCCCTCGCCCCTCTGA 1188 0.4705 METWKIAQPILVMVMMQIANAWVNILYELALKDGMNCSIIVAYRYVFATVFISPLALIIERNKRSNMTWMILFHAFLGGLIGGTVAQNLSVESITLTSATFTTAMSNLGPGITFIVLLCFRLEKLNLITRGGKMKIIGTIIGISGATIMTFIKGPEIKLTTWFHVHRNDHNVLQRDTISGSKNILGALASLGTQVSNALWLINQTKLTERYPYPYSSTALVTLMGALLSLSFAFCVERDLSEWRLGWNVRLFTVAYSGTVTSGVMYVAYSWCLRRKGPLFVSIFSPLMLVIVAFAGSTILDEKLYLGRPARKELSPGRAPSSPLNPKPLPSSRALHPGRSPFGRVRTLPRIPSREESSPVLGGESRDSSSGRRVPPSLDPPREPEPPGEPNPSPL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00068 395 MobiDBLite consensus disorder prediction 312 395 - -
Viun3g00068 395 Pfam EamA-like transporter family 34 150 IPR000620 GO:0016020
Viun3g00068 395 Pfam EamA-like transporter family 186 306 IPR000620 GO:0016020
Viun3g00068 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
Viun3g00068 395 PANTHER WAT1-RELATED PROTEIN 8 306 IPR030184 GO:0016020|GO:0022857
Viun3g00068 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 306 - -
Viun3g00068 395 MobiDBLite consensus disorder prediction 380 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00068 Viun-Chr3 290583 293491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00068 2 307 Nodulin-like Gene Family AT1G68170 42.345 6.61e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00068 - - vun:114178104 706.057