Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00030 ATGGATTCTCATCTCTTTGATCAAGATAAGAAGAAAACATGGAAGCAAACAGTTCTGCTATCGTTTCAAATTGTGGGAATAGTTTATGGTCAACTGAGCACCGCACCTTTATATGTATTTGGGACAATGCGAGCGAGCGATCTTGCAGCAGATCAGGAAGTGGTTTATGAACTCTTCTCCTTCATTTTCTGGACTCTCACCATAATTTCCTTGCTCAAGTATGCCTCCATAGTGTTGAAAGCTGATGATGAAGGAGAGGGTGGCACTGTTGCTCTGTACTCGCTGCTGTGTAGAAATGCAAAAGTTGGTCTACTCCCATGTGACAGAAGTGCAAACGAGGTTGTGCTTTACGAGGAGAAAAGTTCTCCCAAGATCAAAGCTGATTCGAGAGCACGAAGGGCCATTGAGAAACACAAGATCTGTCACTATTTAATATTGTTCTTGGCCCTCTTCGGTTCCTGCATGGCCATTGGGGATGCAGTGCTCACTCCAGCCCTTTCAGTGTACTCAGCTTCAGCAGGAGTTCAGAGATCCTTGACAGACATATTGAATGACATATTTGCCTCGTCAGAACATACTAAGGAGTCCATGTCAAATGCTCTAAAAGCATATGTACCTGTTCCCTCTGCGTGTGTTATATTGGTTGGCCTGTTCATGCTGCAGCATTGCGGTACACGTAAAATTGGGATCATGTTTGCACCAATAATTGCTGCTTGGCTGGTGTTTGTTGCTGCGGTGGGAACGTATAACATTTTCCACTGGGATGTAAAAATCATCTATAAAATATCTCCTTTCTACATATACAGATTCATCACAAAAATTGACATCCACAGATGGAGATTGTTAGGGAGCGTCATTCTATGTGTAGCAGGATCGGAGGCAATGTTTGCTGGCCTAGGCCATTTCTCCAAGAAATCAATTAAGATTACATTTATATGCTTCATCTATCCACTTCTTCTGTTATGCTATGCGGGTCAGGCTGCATATATGTCCAAAAACTTAACTTCTCCTGATTTTAATCATCTTAGCCAATCCATGCCACGTCAGTGCAAACACTTGTACATAGTGTTATCCCTACTCTCTTCAGCCGTGGGAAGCCAAGCAACCATAACAGCGTGTTTCTCCATCATTAACCAGTGTCTGGCATTGAATTGCTTTCCCAGAGTAAAAGTTATTCACACATCAAAAACCATAAACGGCCAGATTTACATCCCCGATGTCAACTGGCTATTGATGATTTTCAGCCTCACTGTAACAATCGGTTTCAGAGACCTTGTGAAAATCGGCAATGCAACAGCTCTGGCTATTATAAGTGGAATGCTTGTGACGACGAGTCTGATGGCACTGATCATTGCTTTGTATTGGGAGAAGGATGTGATGGTGTCTGCGTACTTTCTTGTATGTTTTGGATTCCTAGAGGCTGCATATCTTTCGGCATGTCTGCTACAGTTCCACAAGGGATCGTGGTATCTGGTTGTCCTATTGGCGGTTTCGATGACAGTGATGCTTTCATGGCATTACGGAAGCATGAAGAAGTACGAGTTTGATTTGCAGAACAAAGTATCAACCGAGTGGCTCATAGATATCAGTCCAGGCCTTGGGATTTCGAGGGTACCCGGAATCGGCTTCATCTACACGGACATAGTAGCAGGAATCCCAGCTTTCTTTTCACATTTCATCACAAATCTTCCCGCATTCCATCAGGTGTTGATCTTGGTATCATTCAAGTCCATCCCTGTGCCTTACATAGCAGAAAGTGAGAGGTTCCTTATAGGTAGGATCGGCCCAAAGGATTACAAGATATATCGCTGCATTGTGAGAAGTGGATACTGTGATCACATAAGAGACACGGGTGATTTTGAGGAGAAGATTATCCGTTCCATAGGGGAATTCATATCCATCGAACAGAACGACATCGAGTCCATGATGGGTTGCCCAGATGAAAGAATGATTTTTGTTGGACATTCAAGGGTTGGTGGAAATGGTTTGGTTCCACTGGAGGATTTAGAGTCATCATCGTGCATGGTGAACAATGAATCTCAGATAAGCCCGGTGGCGGAAGAGGCGTTGGAGAGTGGTGGCAGTGGTTGTAAGAAGAGAAAAAAGGTTCGGTTCATGTTGCCTCATAATAGTCCTAAAATGCAGGTATCTGTGAGGAATGAGTTGTTGGAGCTGATCGATGCGAGGGAGAGTGGGAGTGCGTATTTCTTGGGGCAGTCACATTTGGTGGTGCGTGATGGCTCCAACTTTCTCAAGAGATTCTTGATAATGGTGTATCGTTTCAGTGAAAAAAATTGTCGGGAACCTCCTGTGGCTCTTAAAATCCCTCATGCTGCTCTTGTCGAGGTTGGTGTCGTATGTACTATATAA 2370 0.4384 MDSHLFDQDKKKTWKQTVLLSFQIVGIVYGQLSTAPLYVFGTMRASDLAADQEVVYELFSFIFWTLTIISLLKYASIVLKADDEGEGGTVALYSLLCRNAKVGLLPCDRSANEVVLYEEKSSPKIKADSRARRAIEKHKICHYLILFLALFGSCMAIGDAVLTPALSVYSASAGVQRSLTDILNDIFASSEHTKESMSNALKAYVPVPSACVILVGLFMLQHCGTRKIGIMFAPIIAAWLVFVAAVGTYNIFHWDVKIIYKISPFYIYRFITKIDIHRWRLLGSVILCVAGSEAMFAGLGHFSKKSIKITFICFIYPLLLLCYAGQAAYMSKNLTSPDFNHLSQSMPRQCKHLYIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTINGQIYIPDVNWLLMIFSLTVTIGFRDLVKIGNATALAIISGMLVTTSLMALIIALYWEKDVMVSAYFLVCFGFLEAAYLSACLLQFHKGSWYLVVLLAVSMTVMLSWHYGSMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYIAESERFLIGRIGPKDYKIYRCIVRSGYCDHIRDTGDFEEKIIRSIGEFISIEQNDIESMMGCPDERMIFVGHSRVGGNGLVPLEDLESSSCMVNNESQISPVAEEALESGGSGCKKRKKVRFMLPHNSPKMQVSVRNELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGVVCTI 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00030 789 NCBIfam potassium uptake protein 20 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g00030 789 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 8 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun3g00030 789 Pfam K+ potassium transporter 22 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00030 Viun-Chr3 140005 144075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00030 1 789 Inorganic Solute Cotransporters AT1G70300 45.081 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00030 K03549 K12236 gmx:100801073 1385.16