Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00014 ATGGTTCCATATGGGAAAGGTCAGAGCTCAAGGCTAACTGGAGACATGTCCCTTGCCCTGGCTTTTGCCTTAGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAAATTAACAGAGGAACATTGGAATTCAGCATGTCAGAAAGACAATTAGCTACAACTAGCAACTATCCTATCCAAATAAACGAGATATCGAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGTACCAATGGCCTTAACATGGATACATATTCAATACAATTTGCAAAAGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAGAAGAAAAACCGAATCACACTATTAGAGGAGGATAATGATGACAACGATGACACGGGGATGGAAATGCAACTGACAAGATCGACTTTCTCTTTTGACAGACATACTACTGAGAACACCCAACAACTTGGAAAGGCTATTTTCATGCAGAGGCCAATTACTCTTACCAGGTCTAAGGAAGACAGCAACTCAAATAATGAGAACAAAACTGTGAAGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTACCTCTGCCATTAAGAATGTCAATGCTATTTCAGAAGGGAAAAATCAGACGGCCTCCAACCCAGAGAAGGGCAGGATTCCAAATGTAATAGCCAAACTAATGGGGTTGGACATCCTTCCTGACAGAGTGGAAATGGATTCAAAACACGTGATGCTTCAGAAAAGGGAAGGAATATCATCCAAGCATACTGCAAAAGGAAGCCATAAGAAGACTGAACTGCAGCGCAAAGAAACAGATAATTTGGTGCCCATAAAAAGGCAAAAAGATATAGAAGCTTTTAAAACTCCTGCAACTAAGGTTGAAGAGATGATATCGGGGTCAAATAAAAATTTTCTTGTAGAAAAAACCAGCTCTGAGTTGTCTCTTCAGAATGGAAAACCACTGTTGAGAGACCCGGATGGAATAAAAGCACTGAAAGAATTTGACAAGCAGACTAAAAGTTCAGCTGAAAAGAATCTTACTAGAGATGGTCAAAATGATGCTCAGGGGATAATAAGAAAAAAGGATCATCCAAATAACAATAACAGGGAACAGAAAGGCACTATAAGGGGCGGAACCGACTATCCAGTTCTTTACAATATGCTATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGCCCTCGATTCAGCCAGACAAGGTCGTCAATGCAAACAATGTTCAGCCTGAAAAAAAAAACACAAACAAGAATATCACGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAAAAGACACACGTAGTCTCCAAGAACGGGCTTCATGAAGAAAAGCATCGCAGAGAACAACAACTCCAGGTTAGGGAAGAACAAATGCTGATGATGAGACCACAAGGAGGGAGTGAAATCACCTCAAAGAATTCACCAAAATTCCCTCCTCCTCAGAAGAAGCAGCTATCCATGAACCAGGGGTTCAAGAAAAACCACGGAGAAAAAAATGTAGCTGCTATGAAATCCGAAGGCTTTTTAACAAATCATCATGATCTAGTCAGAGATGAAGCATCCAATAACACAAATGAGAAAGTAAAAGAAATTGTCCATAGGAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGAATACGAACGAGCTAAGCGAAGTGGCATTAGAACTTTGATGGATGAAAAACACGTCTATAAACTGGCCAGCAAGAAAATTAAGAATACCAAAAAGCAAAATGTAGACGTGATTGGGAAGATTGATCAAGTTTTGACTGGAAGAAAGGGAGCCAAGCTTATCACTAAACCAGGAAAACAGCAGATTCCCACTTCTGACAAATTTGAAGTTTTGAATGAAGCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACGGATGCACACCTCATTAGCCCCAATGAACAAGTATATGTGGATGCGACTGAACCATTGGATGTGAAGCACCAATCCCATAAAGAATCTGAACTACCTCCTACATTCTCCAGTTCTGTTGGTGGAGAACTTCAAAGCCAACAACATTTGGTAGCAACAGTTCCCAGTGATTTGCATTGCCAAGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACCGGTGAGGTTGCATTACAGAAAACAAATGGAATTCTGGAAGACAGATTGCGTGTTAAGCACTCAAACCTTGAAGATCAGAATATTCGTGAAAAAAGCTTCCAGCAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAAATATTCGTCAACACTGCAGAAGGACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAATGTGGTGGTCGGGAGATTCAAGACGAAGGTAGCAAACTTATTTTAGATTGTGGGTATGAAGTGATGAAAAGAAAGGGGATAAGGCAAGAACTCAACAAAGTTCATAGTTATTCGAGGATATCAATGGGTACCACCAACATAATATCCTTTGATGAGTTAGTTAGGCAGCTGAATAAAGACATGGAGAAGCTCAAGTTCTATGGTAGGAAAACAAGCTGCCAAGTCGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGGCAAAGATCCAGACGTTAACTGCATGTGGGATTTAGGTTGGAATGATGAAACAGTTGCATTTATCGAGAAATACGATGCTATAAGGGATACGGAAAAGAATATTCTTAGTGTTCTACTGGATGAGATCACCCTAGATTTTTGCACGTTCAATCATACACCGAAACAGTAG 2874 0.4005 MVPYGKGQSSRLTGDMSLALAFALENGGKLKRSDSIMGFLHQINRGTLEFSMSERQLATTSNYPIQINEISKGAHKLNQILRACTNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDNDDTGMEMQLTRSTFSFDRHTTENTQQLGKAIFMQRPITLTRSKEDSNSNNENKTVKRQVSQKRSTKTSSISTSAIKNVNAISEGKNQTASNPEKGRIPNVIAKLMGLDILPDRVEMDSKHVMLQKREGISSKHTAKGSHKKTELQRKETDNLVPIKRQKDIEAFKTPATKVEEMISGSNKNFLVEKTSSELSLQNGKPLLRDPDGIKALKEFDKQTKSSAEKNLTRDGQNDAQGIIRKKDHPNNNNREQKGTIRGGTDYPVLYNMLSQLEQVKERSEVKPSIQPDKVVNANNVQPEKKNTNKNITNNEKKSRNNNGIQKTHVVSKNGLHEEKHRREQQLQVREEQMLMMRPQGGSEITSKNSPKFPPPQKKQLSMNQGFKKNHGEKNVAAMKSEGFLTNHHDLVRDEASNNTNEKVKEIVHRKSGQISSPRDQEYERAKRSGIRTLMDEKHVYKLASKKIKNTKKQNVDVIGKIDQVLTGRKGAKLITKPGKQQIPTSDKFEVLNEAEQERISLFRETDAHLISPNEQVYVDATEPLDVKHQSHKESELPPTFSSSVGGELQSQQHLVATVPSDLHCQDVLSLQDPVAADERFVTGEVALQKTNGILEDRLRVKHSNLEDQNIREKSFQQPLTESENCLKWILVMSQIFVNTAEGLFKLNIPFNVLQCGGREIQDEGSKLILDCGYEVMKRKGIRQELNKVHSYSRISMGTTNIISFDELVRQLNKDMEKLKFYGRKTSCQVDVEDYLPKMLEHDVYGKDPDVNCMWDLGWNDETVAFIEKYDAIRDTEKNILSVLLDEITLDFCTFNHTPKQ 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00014 957 MobiDBLite consensus disorder prediction 434 458 - -
Viun3g00014 957 MobiDBLite consensus disorder prediction 358 401 - -
Viun3g00014 957 Pfam DUF761-associated sequence motif 240 256 IPR032795 -
Viun3g00014 957 PANTHER OS01G0228800 PROTEIN-RELATED 1 949 - -
Viun3g00014 957 MobiDBLite consensus disorder prediction 497 517 - -
Viun3g00014 957 MobiDBLite consensus disorder prediction 183 215 - -
Viun3g00014 957 MobiDBLite consensus disorder prediction 376 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00014 Viun-Chr3 58476 63833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00014 765 948 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 45.699 3.20e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00014 - - pvu:PHAVU_002G333000g 1577.76