Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00013 ATGGCCAAGAGATCAGATTTTGCACAGAAGCTGCTCGATGACCTTCGCCTGAGAAAACAACGAATGGCTTCGTCTCAAACTTCAAACCAGTCCCACCATTTCTCCATAGATGCTTATGCTTACACAAAACAAGCATACAGAGGATCCAGAAATATAAAAGCTAATGAAATTGTGACTTCCAGAACTGGGGTGACGCTGAATAGCTCAAGTAGAAGCAACAGATCAGTAAACAATGGGCAAGTTTCAAACCAGATGGTTCCATATGGGAAAGGTCAGAGCTCAAGGCTAACTGGAGACATGTCCCTTGCCCTGGCTTTTGCCTTAGAGAATGGAGGGAAACTAAAAAGAAGTGATTCAATTATGGGTTTCCTTCACCAAATTAACAGAGGAACATTGGAATTCAGCATGTCAGAAAGACAATTAGCTACAACTAGCAACTATCCTATCCAAATAAACGAGATATCGAAAGGTGCACACAAACTAAACCAGATTTTGAGAGCCTGTACCAATGGCCTTAACATGGATACATATTCAATACAATTTGCAAAAGAACTATTGCAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGTTTATGATTACCTCGCAGAAGAAAAACCGAATCACACTATTAGAGGAGGATAATGATGACAACGATGACACGGGGATGGAAATGCAACTGACAAGATCGACTTTCTCTTTTGACAGACATACTACTGAGAACACCCAACAACTTGGAAAGGCTATTTTCATGCAGAGGCCAATTACTCTTACCAGGTCTAAGGAAGACAGCAACTCAAATAATGAGAACAAAACTGTGAAGAGACAAGTTTCTCAGAAGCGATCAACTAAAACTAGCTCTATCTCTACCTCTGCCATTAAGAATGTCAATGCTATTTCAGAAGGGAAAAATCAGACGGCCTCCAACCCAGAGAAGGGCAGGATTCCAAATGTAATAGCCAAACTAATGGGGTTGGACATCCTTCCTGACAGAGTGGAAATGGATTCAAAACACGTGATGCTTCAGAAAAGGGAAGGAATATCATCCAAGCATACTGCAAAAGGAAGCCATAAGAAGACTGAACTGCAGCGCAAAGAAACAGATAATTTGGTGCCCATAAAAAGGCAAAAAGATATAGAAGCTTTTAAAACTCCTGCAACTAAGGTTGAAGAGATGATATCGGGGTCAAATAAAAATTTTCTTGTAGAAAAAACCAGCTCTGAGTTGTCTCTTCAGAATGGAAAACCACTGTTGAGAGACCCGGATGGAATAAAAGCACTGAAAGAATTTGACAAGCAGACTAAAAGTTCAGCTGAAAAGAATCTTACTAGAGATGGTCAAAATGATGCTCAGGGGATAATAAGAAAAAAGGATCATCCAAATAACAATAACAGGGAACAGAAAGGCACTATAAGGGGCGGAACCGACTATCCAGTTCTTTACAATATGCTATCCCAGCTGGAACAAGTGAAAGAAAGATCAGAAGTTAAGCCCTCGATTCAGCCAGACAAGGTCGTCAATGCAAACAATGTTCAGCCTGAAAAAAAAAACACAAACAAGAATATCACGAACAATGAAAAGAAGTCTCGGAACAATAATGGAATTCAAAAGACACACGTAGTCTCCAAGAACGGGCTTCATGAAGAAAAGCATCGCAGAGAACAACAACTCCAGGTTAGGGAAGAACAAATGCTGATGATGAGACCACAAGGAGGGAGTGAAATCACCTCAAAGAATTCACCAAAATTCCCTCCTCCTCAGAAGAAGCAGCTATCCATGAACCAGGGGTTCAAGAAAAACCACGGAGAAAAAAATGTAGCTGCTATGAAATCCGAAGGCTTTTTAACAAATCATCATGATCTAGTCAGAGATGAAGCATCCAATAACACAAATGAGAAAGTAAAAGAAATTGTCCATAGGAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGAATACGAACGAGCTAAGCGAAGTGGCATTAGAACTTTGATGGATGAAAAACACGTCTATAAACTGGCCAGCAAGAAAATTAAGAATACCAAAAAGCAAAATGTAGACGTGATTGGGAAGATTGATCAAGTTTTGACTGGAAGAAAGGGAGCCAAGCTTATCACTAAACCAGGAAAACAGCAGATTCCCACTTCTGACAAATTTGAAGTTTTGAATGAAGCAGAACAAGAAAGGATTAGCTTGTTCAGAGAAACGGATGCACACCTCATTAGCCCCAATGAACAAGTATATGTGGATGCGACTGAACCATTGGATGTGAAGCACCAATCCCATAAAGAATCTGAACTACCTCCTACATTCTCCAGTTCTGTTGGTGGAGAACTTCAAAGCCAACAACATTTGGTAGCAACAGTTCCCAGTGATTTGCATTGCCAAGATGTGTTATCATTGCAAGATCCTGTTGCAGCAGATGAAAGATTCGTGACCGGTGAGGTTGCATTACAGAAAACAAATGGAATTCTGGAAGACAGATTGCGTGTTAAGCACTCAAACCTTGAAGATCAGAATATTCGTGAAAAAAGCTTCCAGCAGCCACTAACAGAAAGTGAAAACTGCCTCAAGTGGATTCTGGTCATGAGTCAAATATTCGTCAACACTGCAGAAGGACTTTTCAAACTGAACATCCCGTTTAACGTTCTTCAATGTGGTGGTCGGGAGATTCAAGACGAAGGTAGCAAACTTATTTTAGATTGTGGGTATGAAGTGATGAAAAGAAAGGGGATAAGGCAAGAACTCAACAAAGTTCATAGTTATTCGAGGATATCAATGGGTACCACCAACATAATATCCTTTGATGAGTTAGTTAGGCAGCTGAATAAAGACATGGAGAAGCTCAAGTTCTATGGTAGGAAAACAAGCTGCCAAGTCGATGTTGAGGACTACCTACCTAAAATGCTTGAACATGATGTTTATGGCAAAGATCCAGACGTTAACTGCATGTGGGATTTAGGTTGGAATGATGAAACAGTTGCATTTATCGAGAAATACGATGCTATAAGGGATACGGAAAAGAATATTCTTAGTGTTCTACTGGATGAGATCACCCTAGATTTTTGCACGTTCAATCATACACCGAAACAGTAG 3126 0.4024 MAKRSDFAQKLLDDLRLRKQRMASSQTSNQSHHFSIDAYAYTKQAYRGSRNIKANEIVTSRTGVTLNSSSRSNRSVNNGQVSNQMVPYGKGQSSRLTGDMSLALAFALENGGKLKRSDSIMGFLHQINRGTLEFSMSERQLATTSNYPIQINEISKGAHKLNQILRACTNGLNMDTYSIQFAKELLQGAIDLEESLRMLVDLQNNSQFMITSQKKNRITLLEEDNDDNDDTGMEMQLTRSTFSFDRHTTENTQQLGKAIFMQRPITLTRSKEDSNSNNENKTVKRQVSQKRSTKTSSISTSAIKNVNAISEGKNQTASNPEKGRIPNVIAKLMGLDILPDRVEMDSKHVMLQKREGISSKHTAKGSHKKTELQRKETDNLVPIKRQKDIEAFKTPATKVEEMISGSNKNFLVEKTSSELSLQNGKPLLRDPDGIKALKEFDKQTKSSAEKNLTRDGQNDAQGIIRKKDHPNNNNREQKGTIRGGTDYPVLYNMLSQLEQVKERSEVKPSIQPDKVVNANNVQPEKKNTNKNITNNEKKSRNNNGIQKTHVVSKNGLHEEKHRREQQLQVREEQMLMMRPQGGSEITSKNSPKFPPPQKKQLSMNQGFKKNHGEKNVAAMKSEGFLTNHHDLVRDEASNNTNEKVKEIVHRKSGQISSPRDQEYERAKRSGIRTLMDEKHVYKLASKKIKNTKKQNVDVIGKIDQVLTGRKGAKLITKPGKQQIPTSDKFEVLNEAEQERISLFRETDAHLISPNEQVYVDATEPLDVKHQSHKESELPPTFSSSVGGELQSQQHLVATVPSDLHCQDVLSLQDPVAADERFVTGEVALQKTNGILEDRLRVKHSNLEDQNIREKSFQQPLTESENCLKWILVMSQIFVNTAEGLFKLNIPFNVLQCGGREIQDEGSKLILDCGYEVMKRKGIRQELNKVHSYSRISMGTTNIISFDELVRQLNKDMEKLKFYGRKTSCQVDVEDYLPKMLEHDVYGKDPDVNCMWDLGWNDETVAFIEKYDAIRDTEKNILSVLLDEITLDFCTFNHTPKQ 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00013 1041 PANTHER OS01G0228800 PROTEIN-RELATED 8 1033 - -
Viun3g00013 1041 Pfam DUF761-associated sequence motif 324 340 IPR032795 -
Viun3g00013 1041 MobiDBLite consensus disorder prediction 442 485 - -
Viun3g00013 1041 MobiDBLite consensus disorder prediction 267 299 - -
Viun3g00013 1041 MobiDBLite consensus disorder prediction 460 475 - -
Viun3g00013 1041 MobiDBLite consensus disorder prediction 65 92 - -
Viun3g00013 1041 MobiDBLite consensus disorder prediction 518 542 - -
Viun3g00013 1041 MobiDBLite consensus disorder prediction 581 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00013 Viun-Chr3 57880 63833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00013 1 377 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 37.310 9.65e-51 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00013 - - pvu:PHAVU_002G333000g 1702.18