Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00010 ATGAGGTGGTGCAGAGAGGTGTTCTCTGTGAGTGGGTCTGGGTTGGGTGCTCATGCCATTGCGCTCTCACTAGCACCTATAGTTACTGCTTCCTTTTGCAGCAAAAGTCTTGTGTTGCCATTCCAAAATTCTCCCTTCAAATTGAAATTCACTGACTCGTCTTCTCTTGCCCTCACCCATCGTAAGCAGCTCCTACCCGCCGCACTGCCACTAACACAGCCCTCTACTTCAAGGGAGGATGATTTTGATTTTTTGGTTGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCCGAAGTCGCCAAACACCGTTCTTTCTTAGAATTTCAGGACCTCGACATCAACGGAAGAGTCTATCTGAATGAACAAGGGATTAATGCCCAGATATCTCCATCAGAAAATGGACATACCTTTCCAGCATTAAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGGTATGTCACATCTTCCGTTGCTTGATCCTTCAATGCGTGCAATACCTTTATCACCATCAGAATGGAAAGAAAGATTGGAAGCAGTCAATAAAACTGATCTTAACAGAGATTTCGTTTTATTGGATGTCAGAAATGGTTATGAGTGGGATGTTGGACATTTTCGTGGGGCTCAACGACCTAGTGTGGACTGCTTTAGGAACACTTCATTTGGTCTTTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAAAGTGGATAAAGAAAAGGCAAACATATTGATGTATTGCACAGGAGGGATTCGATGTGATGTATATTCTACAATACTAAGGAGGCAGGGATTTCAGAATCTATATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGTGCTGCTGAATGGGTGGGAAATTTATTTGTATTTGACTCCCGTTTGTCTCTCCCTCCTTCTGTTTACCATACTGGGGCCACAACCGAAGCAGAATTAACTCCAGTTTCTGGAGATGATAAGTTTGCAAATTGCCATGTATGTAATTTGGAAGTCAGTGAATTGAGACATAGGAACTGCGCAAATCTTGATTGTAATTTACTTTTTCTATGCTGCACAAAATGTGTAAAGGATCTAAGAGGTTGTTGCTGTTTAACGTGCACTGCTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACAACTATCGGGATATGGATTTGCCAGAGCAAGGACTAATTCAACTTAAATGCAGCAATGACTAA 1248 0.4191 MRWCREVFSVSGSGLGAHAIALSLAPIVTASFCSKSLVLPFQNSPFKLKFTDSSSLALTHRKQLLPAALPLTQPSTSREDDFDFLVVNFYHFVFIQDPQAEVAKHRSFLEFQDLDINGRVYLNEQGINAQISPSENGHTFPALKLRYKPSLVQFEGGMSHLPLLDPSMRAIPLSPSEWKERLEAVNKTDLNRDFVLLDVRNGYEWDVGHFRGAQRPSVDCFRNTSFGLSQEEITASDPLSKVDKEKANILMYCTGGIRCDVYSTILRRQGFQNLYTLKGGVSHYLKNEGAAEWVGNLFVFDSRLSLPPSVYHTGATTEAELTPVSGDDKFANCHVCNLEVSELRHRNCANLDCNLLFLCCTKCVKDLRGCCCLTCTAAPRLRPVLNGMQRYKKWHNYRDMDLPEQGLIQLKCSND 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00010 415 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 77 134 IPR020936 -
Viun3g00010 415 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 172 306 IPR036873 -
Viun3g00010 415 Gene3D - 166 320 IPR036873 -
Viun3g00010 415 Pfam UPF0176 acylphosphatase like domain 86 136 IPR040503 -
Viun3g00010 415 Gene3D - 73 139 - -
Viun3g00010 415 ProSiteProfiles Rhodanese domain profile. 190 293 IPR001763 -
Viun3g00010 415 CDD RHOD_YceA 173 286 - -
Viun3g00010 415 Pfam Rhodanese-like domain 189 285 IPR001763 -
Viun3g00010 415 SMART rhod_4 174 290 IPR001763 -
Viun3g00010 415 Pfam Rhodanase C-terminal 295 376 IPR022111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00010 Viun-Chr3 37250 43795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00010 83 401 Sulfurtransferasese or Rhodanese AT1G17850 61.878 3.18e-158 452