Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g00008 ATGAGGTGGTGCAGAGAGGTGTTCTCTGTGAGTGGGTCTGGGTTGGGTGCTCATGCCATTGCGCTCTCACTAGCACCTATAGTTACTGCTTCCTTTTGCAGCAAAAGTCTTGTGTTGCCATTCCAAAATTCTCCCTTCAAATTGAAATTCACTGACTCGTCTTCTCTTGCCCTCACCCATCGTAAGCAGCTCCTACCCGCCGCACTGCCACTAACACAGCCCTCTACTTCAAGGGAGGATGATTTTGATTTTTTGGTTGTCAATTTCTACCATTTTGTGTTCATCCAAGACCCACAAGCCGAAGTCGCCAAACACCGTTCTTTCTTAGAATTTCAGGACCTCGACATCAACGGAAGAGTCTATCTGAATGAACAAGGGATTAATGCCCAGTATAGTGGACCATCAAAAGATGCTCTGGCATATGTCAACTGGTTAAGAGAGGATAACAGGTTTTCTGACATATTGGTTCAGATATCTCCATCAGAAAATGGACATACCTTTCCAGCATTAAAGTTGCGTTATAAGCCTTCATTGGTACAGTTTGAAGGTGGTATGTCACATCTTCCGTTGCTTGATCCTTCAATGCGTGCAATACCTTTATCACCATCAGAATGGAAAGAAAGATTGGAAGCAGTCAATAAAACTGATCTTAACAGAGATTTCGTTTTATTGGATGTCAGAAATGGTTATGAGTGGGATGTTGGACATTTTCGTGGGGCTCAACGACCTAGTGTGGACTGCTTTAGGAACACTTCATTTGGTCTTTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAAAGTGGATAAAGAAAAGGCAAACATATTGATGTATTGCACAGGAGGGATTCGATGTGATGTATATTCTACAATACTAAGGCAGGGATTTCAGAATCTATATACCCTGAAGGGAGGTGTTTCTCACTATTTAAAGAACGAAGGTGCTGCTGAATGGGTGGGAAATTTATTTGTATTTGACTCCCGTTTGTCTCTCCCTCCTTCTGTTTACCATACTGGGGCCACAACCGAAGCAGAATTAACTCCAGTTTCTGGAGATGATAAGTTTGCAAATTGCCATGTATGTAATTTGGAAGTCAGTGAATTGAGACATAGGAACTGCGCAAATCTTGATTGTAATTTACTTTTTCTATGCTGCACAAAATGTGTAAAGGATCTAAGAGGTTGTTGCTGTTTAACGTGCACTGCTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACAACTATCGGGATATGGATTTGCCAGAGCAAGGACTAATTCAACTTAAATGCAGCAATGACTAA 1326 0.417 MRWCREVFSVSGSGLGAHAIALSLAPIVTASFCSKSLVLPFQNSPFKLKFTDSSSLALTHRKQLLPAALPLTQPSTSREDDFDFLVVNFYHFVFIQDPQAEVAKHRSFLEFQDLDINGRVYLNEQGINAQYSGPSKDALAYVNWLREDNRFSDILVQISPSENGHTFPALKLRYKPSLVQFEGGMSHLPLLDPSMRAIPLSPSEWKERLEAVNKTDLNRDFVLLDVRNGYEWDVGHFRGAQRPSVDCFRNTSFGLSQEEITASDPLSKVDKEKANILMYCTGGIRCDVYSTILRQGFQNLYTLKGGVSHYLKNEGAAEWVGNLFVFDSRLSLPPSVYHTGATTEAELTPVSGDDKFANCHVCNLEVSELRHRNCANLDCNLLFLCCTKCVKDLRGCCCLTCTAAPRLRPVLNGMQRYKKWHNYRDMDLPEQGLIQLKCSND 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g00008 441 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 77 419 IPR020936 -
Viun3g00008 441 Pfam Rhodanase C-terminal 321 402 IPR022111 -
Viun3g00008 441 Pfam Rhodanese-like domain 216 311 IPR001763 -
Viun3g00008 441 Gene3D - 193 346 IPR036873 -
Viun3g00008 441 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 185 329 IPR036873 -
Viun3g00008 441 SMART rhod_4 201 316 IPR001763 -
Viun3g00008 441 CDD RHOD_YceA 200 312 - -
Viun3g00008 441 Gene3D - 73 179 - -
Viun3g00008 441 Pfam UPF0176 acylphosphatase like domain 86 176 IPR040503 -
Viun3g00008 441 ProSiteProfiles Rhodanese domain profile. 217 319 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g00008 Viun-Chr3 37249 43795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun3g00008 83 427 Sulfurtransferasese or Rhodanese AT1G17850 68.232 1.14e-180 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g00008 - - gmx:100814358 743.806