Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02930 ATGTCAAAAAAAAATTCGTACAATCCTTCCTTGAGTGTACCTTTCCTCAATGATGAGGAGAAAGCCATAGCCTCTTATTCTTCTGCCAAAAATACTGTATCCTTCTTCCGTACATGCCTTAATGGACTCAATACAATAGCAGGTGTTGGCATACTCTCAGTTCCCTATGCTCTTGCAACAGGAGGCTGGTTAAGCTTGGCTCTTCTGTTTTCTATTGCTGCTGCTGCATTTTACACGGGTCTTCTGATTAAAAGATGCATGGATAAGGACTCAAACATTAGAAGCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGGAGACTAATAGTGTCAGTATCCATGTACACGGAACTATATCTTGTTTCAATAGGATTCTTGATTCTAGAAGGTGATAACTTGAGTAACATGTTTCCCAACGCCAAGGTTTCGATAGCTGCCTTAACAATTGCAGGGAAACAATTCTTTGTGATATTGGTTGCCCTTATCATTCTGCCCACAGTTTGGTTGGATAACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTTTTTGCTTCTCTTCTCATCATCCTTTCAATAACATGGACTGCAACATTTGATGGAGTTGGTTTTCATCATAAAGGAACTCTTGTGCATTGGAATGGTCTCCCCACAGCTGTTAGCTTGTACGCCTTCTGTTATTGTGCACATCCTGTCTTTCCCACATTGTACAATTCGATGGAAAACAAACATCAGTTCTCTAACGTCCTAATTGTATGTTTTGTCCTAACCACTGTGGGTTATGCATCGATGGCTATAGTGGGTTATTTAATGTTTGGTGACGGGGCTGAATCACAAATAACATTGAACCTGCCTCTGGACAAAGTTAGCTCAAAGTTAGCAATATACACAACCTTGGTGAATCCCATATCCAAGTTTGCTTTGATGGCAACACCTATTACGAATGCTTTGAAAGACTTGCTTCCGAAAACGTACAAGAATAGGGTGACGAGCATCTTACTAAGCACAGTGTTGGTAATGAGCACCACCGTTGTTGCTCTTGCTGTCCCTTTTTTTGGGTCTCTCATGTCTCTGATTGGAGCCTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCGGGCACTTACAAGAAATTTGGGTGTGAGACGGTTGCCATAGTGATGATAATAATGATAGCTATTGTAATGGCAATTTCTGGGACCTACATCTCTCTCATGGAAATAGCCCACAATTTGTAA 1266 0.4092 MSKKNSYNPSLSVPFLNDEEKAIASYSSAKNTVSFFRTCLNGLNTIAGVGILSVPYALATGGWLSLALLFSIAAAAFYTGLLIKRCMDKDSNIRSYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNMFPNAKVSIAALTIAGKQFFVILVALIILPTVWLDNLSLLSYVSASGVFASLLIILSITWTATFDGVGFHHKGTLVHWNGLPTAVSLYAFCYCAHPVFPTLYNSMENKHQFSNVLIVCFVLTTVGYASMAIVGYLMFGDGAESQITLNLPLDKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPKTYKNRVTSILLSTVLVMSTTVVALAVPFFGSLMSLIGAFLSVTASILLPCLCYLKISGTYKKFGCETVAIVMIIMIAIVMAISGTYISLMEIAHNL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02930 421 PANTHER OS05G0424000 PROTEIN-RELATED 40 405 - -
Viun2g02930 421 Pfam Transmembrane amino acid transporter protein 32 412 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02930 Viun-Chr2 33587184 33588949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02930 19 417 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.000 5.71e-172 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02930 K15015 - gmx:100794374 662.144