Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02908 ATGACCATGGTCAAACATAGACCTTCTTCATCTGTGCTTTTGTTCTTGTTCATCGTATTTATATTTATGTCGTCTCTCAATCGCGTTTCTGGAGAAGACCCTATTGATATTTACTGTCCCACTGAATTCCCACTGTACAACCTCAATAGTTCATTCCACGACAACCTCAACCTTGTTCTGGGGTTGCTTTCCTCCGACAACGCTTCAAAGGCTGGTTTCTATAACACTTCTATAGGAGAAGAGCCAAACAAAGTGTACGGACAATCACTGTGCAGAGGGGACATCAGCAACTCCACTGTTTGCAAAGAATGCATTGAGAAAGCAAGCCAAGATATAATGAATAGTTGCAGGAGTGAAAATGCAATGATATGGTATAACCTTTGCCAAGTACGCTACTCCTTCCAGAGCTTTGATGTGGTGGCTTACACCGGAAAGTATCCGAAGCAGAATGATGAGGAGAAGAATGTCTCTGATCCTATTCGGTTCAGGGAATACTTGAGTTTTCTAATGAACAATCTCTCAACCGAGGCTGCTTCTGTGAAGAACATGTTTGCGGCTGGTGAAATTGACTATCCTGGGAAGAAGACAATTTATGGGTTGGTCCAATGTACGAGGGACATGTCCCTCGAAAACTGTGGCAGTTGTTTGAGTTCCGCCTTCACGGAAATCACTGCATGCTGCTCCTACAGAGAAGGTGGGATTATTCTTAGTCGTACTTGCAATATGAGGTTCCAAATGTCTCAGTTCTTCAATGCTTCTTCTGCATATCTGTTGGTTTACCCAACTTCCACAGGAGGGAAATGGAAGTCCTGGATGTTTGTGCTGATTATATGTGGGTCGATTTTTGTATTGGCACTTGTTGTTGGGTTGGGCATTGCATGCTTACGAGGAAAGAACAATAGAGACAGAGATAAAGAAATGAGTGAACGAACGCTATTACAAGAGTTGACCACCCCTAAGCATGTGGCTGTCACAGAAGAAGGTGACTTGATTAGTTCGGATGAAATGTTGTTCATGACTTTAGCTTCCATCAGGGTTGCTACTGATGAGTTTTCTGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTGCCAGATGGTAATGAAGTAGCAGTTAAAAGATTGTCGAGAAAATCTTGGCAAGGCATAGAGGAATTTAAAAATGAAGTTGTGTTGATTGCCAAACTTCAACACAAGAATTTGGTGAGGCTGTTAGGTTGTGCCTTGGAGGGAGAAGAAAAGTTACTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAACTTATCTTTGATCCAGAAAAACGTTCAAAACTTGATTGGAAGACATACAATGGTATTATCAATGGCATAGCGAGAGGACTACTTTATCTCCACGAGGAGTCTCGCCTTAAAATCATTCACAGAGACTTAAAACCCAACAATGTGTTGTTAGACTACGATCTGTCGGCTAAAATATCAGATTTTGGTATGGCCAGGATATTTTCTGAGAATCAGAATGCAGCAAACACCAAAAGAGTCGTGGGAACATACTTCGTCGACTTGAACACTTGCAAAGCACAGGACCAGAACGACGGCCCTGTCTATCTGTACCATAACTGTTCAGGCGGCAATACCACCGCCAACAGTGCCTACCGACTAAACGTCGGCACCCTCTTCAGTTCCCTGTCTTCAAACTCCACAGAATACTCAAACGACACCGTCGGAACATCCTCCTCCGACAGGGTGTACGGACTGTTCATGTGCAGGGGAGACGTTCCCACAGCGCTGTGTCGACAGTGCGTGTTGAACGCAACGCGACGTCTCAGCTCAGAGTGCTCTCTGGCCAAACAGGCGGTGATATGGTACGACGAGTGCACTGTTCGCTACTCCAACCGCTCTTTCTTCTCCACGGTGGACGTTCGGCCGCGTGTCGGACTCCTCAACAGTGCCAACATATCCAACCAAGAAAGCTTCATGAGACTACTTTTCTCAACCATTAACAGTACCGCGGATGAGGCTGCCAATTTTTCCATTGGTGTGAAGAAATACGCGACGAGGCAGGCCAACATTTCTGGGTTTCAGTCACTGTACTGTTTGGCTCAGTGCACACCCGATCTGTCCCCGCAAGACTGCAGAAGGTGTCTCAGTGGTGTGATCGGAGACCTTCCTTGGTGCTGTCAGGGAAAGCAGGGAGGAAGGGTTCTCTATCCTAGCTGCAACGTTAGGTACGAACTCTACCCTTTCTACCGCCAAGTCACACCCGCGCCTTCACCCTCACCGCTCCTACTTCCTCCTCCAGCTTCCGCTAATTCCCAAGGAGGCGGTGGTATCTCAACTGGGACCATTGTTGCGATTGTGGTTCCAATTACGGTCGCGGTGCTTCTATTTATAGTGGGAATTTGTTTCTTGAGTAGAAGAGCTAGAAAGAAGCAGAGTTCTGTAAAGGAAGGAAAAAATGTAGATGACATCACCACTGTGGAATCCTTGCAATTCGGTTTTGGCACGATCGAAGCGGCCACAAACAATTTCTCTGCGGAAAACAAGCTAGGGGAGGGTGGATTTGGTGAGGTTTTCAAGGGCACTCTTCCGAGTGGACAAGAAATAGCTGTCAAGAGACTCTCCAAAAGCTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTCCAACATAGAAATTTAGTGACGCTTCTCGGGTTTTGCTTGCAAGGAGAAGAGAAGATTCTTGTATATGAATATATTCCCAACAAAAGTCTCGACTACACTCTCTTCGACCCTGAAAAGCAAAGGGAGTTGGATTGGAGGAGACGATACAAGATTATTGAAGGGACTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACATCGAGATCTTAAAGCAAGTAACATATTGTTAGACAGGGATTTGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACGGACAGAATTGTAGGGACCTATGGTTATATGGCTCCAGAATATGCAATGCATGGAGAGTTCTCTGTTAAGTCTGACGTGTACAGTTTTGGAGTCCTCCTCATGGAGATTATAAGCGGCAAAAAGAACAGCTCTTTCTATCAAACAGATGGTGCTGAGGATCTCTTGAGCTATGCGTGGCTACTTTGGAAAGATGGAACACCTTTGGAACTGATGGATCCCATATTAAGAGAATCCTACAATCAGAATGAAATCATCAAAAGCATTCATATTGGTCTTCTGTGTGTCCAAGAAGATCCAGAAGACAGACCTACAATGGCAACAATAGTTCTTATGCTAGATAGTAACACTGTTACTCTACCAACTCCTAAGCGGCCTGCATTTTTCATCCACAGTGGAACTGATACAAACATGCCAAAAGAGCAGCAATTTGGTCAGTCTATAACAAAATCATTACCGGTGTCTATCAATGATGCTTCCATTAGCGAAATGGATCCTAGATAA 3507 0.4445 MTMVKHRPSSSVLLFLFIVFIFMSSLNRVSGEDPIDIYCPTEFPLYNLNSSFHDNLNLVLGLLSSDNASKAGFYNTSIGEEPNKVYGQSLCRGDISNSTVCKECIEKASQDIMNSCRSENAMIWYNLCQVRYSFQSFDVVAYTGKYPKQNDEEKNVSDPIRFREYLSFLMNNLSTEAASVKNMFAAGEIDYPGKKTIYGLVQCTRDMSLENCGSCLSSAFTEITACCSYREGGIILSRTCNMRFQMSQFFNASSAYLLVYPTSTGGKWKSWMFVLIICGSIFVLALVVGLGIACLRGKNNRDRDKEMSERTLLQELTTPKHVAVTEEGDLISSDEMLFMTLASIRVATDEFSDTNKLGQGGFGAVYKGVLPDGNEVAVKRLSRKSWQGIEEFKNEVVLIAKLQHKNLVRLLGCALEGEEKLLIYEFMSNKSLDQLIFDPEKRSKLDWKTYNGIINGIARGLLYLHEESRLKIIHRDLKPNNVLLDYDLSAKISDFGMARIFSENQNAANTKRVVGTYFVDLNTCKAQDQNDGPVYLYHNCSGGNTTANSAYRLNVGTLFSSLSSNSTEYSNDTVGTSSSDRVYGLFMCRGDVPTALCRQCVLNATRRLSSECSLAKQAVIWYDECTVRYSNRSFFSTVDVRPRVGLLNSANISNQESFMRLLFSTINSTADEAANFSIGVKKYATRQANISGFQSLYCLAQCTPDLSPQDCRRCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRQVTPAPSPSPLLLPPPASANSQGGGGISTGTIVAIVVPITVAVLLFIVGICFLSRRARKKQSSVKEGKNVDDITTVESLQFGFGTIEAATNNFSAENKLGEGGFGEVFKGTLPSGQEIAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVTLLGFCLQGEEKILVYEYIPNKSLDYTLFDPEKQRELDWRRRYKIIEGTARGIQYLHEDSRLRIIHRDLKASNILLDRDLNPKISDFGMARIFGVDQTQGNTDRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTDGAEDLLSYAWLLWKDGTPLELMDPILRESYNQNEIIKSIHIGLLCVQEDPEDRPTMATIVLMLDSNTVTLPTPKRPAFFIHSGTDTNMPKEQQFGQSITKSLPVSINDASISEMDPR 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02908 1168 ProSiteProfiles Protein kinase domain profile. 351 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02908 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 964 976 IPR008271 GO:0004672|GO:0006468
Viun2g02908 1168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Viun2g02908 1168 SUPERFAMILY Protein kinase-like (PK-like) 829 1136 IPR011009 -
Viun2g02908 1168 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 550 1168 - -
Viun2g02908 1168 FunFam Cysteine-rich receptor-like protein kinase 10 147 249 - -
Viun2g02908 1168 FunFam Cysteine-rich receptor-like protein kinase 10 314 426 - -
Viun2g02908 1168 CDD STKc_IRAK 849 1115 - -
Viun2g02908 1168 Gene3D Transferase(Phosphotransferase) domain 1 427 519 - -
Viun2g02908 1168 Gene3D Transferase(Phosphotransferase) domain 1 919 1122 - -
Viun2g02908 1168 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Viun2g02908 1168 Pfam Protein tyrosine and serine/threonine kinase 845 1112 IPR001245 GO:0004672|GO:0006468
Viun2g02908 1168 ProSitePatterns Protein kinases ATP-binding region signature. 849 871 IPR017441 GO:0005524
Viun2g02908 1168 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 805 918 - -
Viun2g02908 1168 SMART serkin_6 351 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02908 1168 SMART serkin_6 843 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02908 1168 ProSiteProfiles Gnk2-homologous domain profile. 640 748 IPR002902 -
Viun2g02908 1168 FunFam cysteine-rich receptor-like protein kinase 10 919 1121 - -
Viun2g02908 1168 Gene3D Phosphorylase Kinase; domain 1 803 918 - -
Viun2g02908 1168 Gene3D Phosphorylase Kinase; domain 1 326 426 - -
Viun2g02908 1168 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Viun2g02908 1168 ProSiteProfiles Protein kinase domain profile. 843 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02908 1168 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Viun2g02908 1168 ProSiteProfiles Gnk2-homologous domain profile. 533 634 IPR002902 -
Viun2g02908 1168 SUPERFAMILY Protein kinase-like (PK-like) 332 517 IPR011009 -
Viun2g02908 1168 Gene3D - 643 748 IPR038408 -
Viun2g02908 1168 Gene3D - 37 137 IPR038408 -
Viun2g02908 1168 Gene3D - 145 249 IPR038408 -
Viun2g02908 1168 Gene3D - 533 634 IPR038408 -
Viun2g02908 1168 FunFam Cysteine-rich receptor-like protein kinase 25 642 748 - -
Viun2g02908 1168 Pfam Protein kinase domain 352 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02908 1168 Pfam Salt stress response/antifungal 652 746 IPR002902 -
Viun2g02908 1168 Pfam Salt stress response/antifungal 46 134 IPR002902 -
Viun2g02908 1168 Pfam Salt stress response/antifungal 540 631 IPR002902 -
Viun2g02908 1168 Pfam Salt stress response/antifungal 154 245 IPR002902 -
Viun2g02908 1168 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 533 633 - -
Viun2g02908 1168 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 427 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02908 Viun-Chr2 33394977 33401453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02908 16 517 Receptor kinase-like Gene Family AT4G05200 43.454 3.57e-116 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun2g02908 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02908 - - vun:114173511 2292.69