Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02907 ATGACCATGGTCAAACATAGACCTTCTTCATCTGTGCTTTTGTTCTTGTTCATCGTATTTATATTTATGTCGTCTCTCAATCGCGTTTCTGGAGAAGACCCTATTGATATTTACTGTCCCACTGAATTCCCACTGTACAACCTCAATAGTTCATTCCACGACAACCTCAACCTTGTTCTGGGGTTGCTTTCCTCCGACAACGCTTCAAAGGCTGGTTTCTATAACACTTCTATAGGAGAAGAGCCAAACAAAGTGTACGGACAATCACTGTGCAGAGGGGACATCAGCAACTCCACTGTTTGCAAAGAATGCATTGAGAAAGCAAGCCAAGATATAATGAATAGTTGCAGGAGTGAAAATGCAATGATATGGTATAACCTTTGCCAAGTACGCTACTCCTTCCAGAGCTTTGATGTGGTGGCTTACACCGGAAAGTATCCGAAGCAGAATGATGAGGAGAAGAATGTCTCTGATCCTATTCGGTTCAGGGAATACTTGAGTTTTCTAATGAACAATCTCTCAACCGAGGCTGCTTCTGTGAAGAACATGTTTGCGGCTGGTGAAATTGACTATCCTGGGAAGAAGACAATTTATGGGTTGGTCCAATGTACGAGGGACATGTCCCTCGAAAACTGTGGCAGTTGTTTGAGTTCCGCCTTCACGGAAATCACTGCATGCTGCTCCTACAGAGAAGGTGGGATTATTCTTAGTCGTACTTGCAATATGAGGTTCCAAATGTCTCAGTTCTTCAATGCTTCTTCTGCATATCTGTTGGTTTACCCAACTTCCACAGGAGGGAAATGGAAGTCCTGGATGTTTGTGCTGATTATATGTGGGTCGATTTTTGTATTGGCACTTGTTGTTGGGTTGGGCATTGCATGCTTACGAGGAAAGAACAATAGAGACAGAGATAAAGAAATGAGTGAACGAACGCTATTACAAGAGTTGACCACCCCTAAGCATGTGGCTGTCACAGAAGAAGGTGACTTGATTAGTTCGGATGAAATGTTGTTCATGACTTTAGCTTCCATCAGGGTTGCTACTGATGAGTTTTCTGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTGCCAGATGGTAATGAAGTAGCAGTTAAAAGATTGTCGAGAAAATCTTGGCAAGGCATAGAGGAATTTAAAAATGAAGTTGTGTTGATTGCCAAACTTCAACACAAGAATTTGGTGAGGCTGTTAGGTTGTGCCTTGGAGGGAGAAGAAAAGTTACTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAACTTATCTTTGAAAAACGTTCAAAACTTGATTGGAAGACATACAATGGTATTATCAATGGCATAGCGAGAGGACTACTTTATCTCCACGAGGAGTCTCGCCTTAAAATCATTCACAGAGACTTAAAACCCAACAATGTGTTGTTAGACTACGATCTGTCGGCTAAAATATCAGATTTTGGTATGGCCAGGATATTTTCTGAGAATCAGAATGCAGCAAACACCAAAAGAGTCGTGGGAACATACTTCGTCGACTTGAACACTTGCAAAGCACAGGACCAGAACGACGGCCCTGTCTATCTGTACCATAACTGTTCAGGCGGCAATACCACCGCCAACAGTGCCTACCGACTAAACGTCGGCACCCTCTTCAGTTCCCTGTCTTCAAACTCCACAGAATACTCAAACGACACCGTCGGAACATCCTCCTCCGACAGGGTGTACGGACTGTTCATGTGCAGGGGAGACGTTCCCACAGCGCTGTGTCGACAGTGCGTGTTGAACGCAACGCGACGTCTCAGCTCAGAGTGCTCTCTGGCCAAACAGGCGGTGATATGGTACGACGAGTGCACTGTTCGCTACTCCAACCGCTCTTTCTTCTCCACGGTGGACGTTCGGCCGCGTGTCGGACTCCTCAACAGTGCCAACATATCCAACCAAGAAAGCTTCATGAGACTACTTTTCTCAACCATTAACAGTACCGCGGATGAGGCTGCCAATTTTTCCATTGGTGTGAAGAAATACGCGACGAGGCAGGCCAACATTTCTGGGTTTCAGTCACTGTACTGTTTGGCTCAGTGCACACCCGATCTGTCCCCGCAAGACTGCAGAAGGTGTCTCAGTGGTGTGATCGGAGACCTTCCTTGGTGCTGTCAGGGAAAGCAGGGAGGAAGGGTTCTCTATCCTAGCTGCAACGTTAGGTACGAACTCTACCCTTTCTACCGCCAAGTCACACCCGCGCCTTCACCCTCACCGCTCCTACTTCCTCCTCCAGCTTCCGCTAATTCCCAAGGAGGCGGTGGTATCTCAACTGGGACCATTGTTGCGATTGTGGTTCCAATTACGGTCGCGGTGCTTCTATTTATAGTGGGAATTTGTTTCTTGAGTAGAAGAGCTAGAAAGAAGCAGAGTTCTGTAAAGGAAGGAAAAAATGTAGATGACATCACCACTGTGGAATCCTTGCAATTCGGTTTTGGCACGATCGAAGCGGCCACAAACAATTTCTCTGCGGAAAACAAGCTAGGGGAGGGTGGATTTGGTGAGGTTTTCAAGGGCACTCTTCCGAGTGGACAAGAAATAGCTGTCAAGAGACTCTCCAAAAGCTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTGGTGGTGGTTGCCAAGCTCCAACATAGAAATTTAGTGACGCTTCTCGGGTTTTGCTTGCAAGGAGAAGAGAAGATTCTTGTATATGAATATATTCCCAACAAAAGTCTCGACTACACTCTCTTCGACCCTGAAAAGCAAAGGGAGTTGGATTGGAGGAGACGATACAAGATTATTGAAGGGACTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAGAATTATACATCGAGATCTTAAAGCAAGTAACATATTGTTAGACAGGGATTTGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACGGACAGAATTGTAGGGACCTATGGTTATATGGCTCCAGAATATGCAATGCATGGAGAGTTCTCTGTTAAGTCTGACGTGTACAGTTTTGGAGTCCTCCTCATGGAGATTATAAGCGGCAAAAAGAACAGCTCTTTCTATCAAACAGATGGTGCTGAGGATCTCTTGAGCTATGCGTGGCTACTTTGGAAAGATGGAACACCTTTGGAACTGATGGATCCCATATTAAGAGAATCCTACAATCAGAATGAAATCATCAAAAGCATTCATATTGGTCTTCTGTGTGTCCAAGAAGATCCAGAAGACAGACCTACAATGGCAACAATAGTTCTTATGCTAGATAGTAACACTGTTACTCTACCAACTCCTAAGCGGCCTGCATTTTTCATCCACAGTGGAACTGATACAAACATGCCAAAAGAGCAGCAATTTGGTCAGTCTATAACAAAATCATTACCGGTGTCTATCAATGATGCTTCCATTAGCGAAATGGATCCTAGATAA 3501 0.4444 MTMVKHRPSSSVLLFLFIVFIFMSSLNRVSGEDPIDIYCPTEFPLYNLNSSFHDNLNLVLGLLSSDNASKAGFYNTSIGEEPNKVYGQSLCRGDISNSTVCKECIEKASQDIMNSCRSENAMIWYNLCQVRYSFQSFDVVAYTGKYPKQNDEEKNVSDPIRFREYLSFLMNNLSTEAASVKNMFAAGEIDYPGKKTIYGLVQCTRDMSLENCGSCLSSAFTEITACCSYREGGIILSRTCNMRFQMSQFFNASSAYLLVYPTSTGGKWKSWMFVLIICGSIFVLALVVGLGIACLRGKNNRDRDKEMSERTLLQELTTPKHVAVTEEGDLISSDEMLFMTLASIRVATDEFSDTNKLGQGGFGAVYKGVLPDGNEVAVKRLSRKSWQGIEEFKNEVVLIAKLQHKNLVRLLGCALEGEEKLLIYEFMSNKSLDQLIFEKRSKLDWKTYNGIINGIARGLLYLHEESRLKIIHRDLKPNNVLLDYDLSAKISDFGMARIFSENQNAANTKRVVGTYFVDLNTCKAQDQNDGPVYLYHNCSGGNTTANSAYRLNVGTLFSSLSSNSTEYSNDTVGTSSSDRVYGLFMCRGDVPTALCRQCVLNATRRLSSECSLAKQAVIWYDECTVRYSNRSFFSTVDVRPRVGLLNSANISNQESFMRLLFSTINSTADEAANFSIGVKKYATRQANISGFQSLYCLAQCTPDLSPQDCRRCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRQVTPAPSPSPLLLPPPASANSQGGGGISTGTIVAIVVPITVAVLLFIVGICFLSRRARKKQSSVKEGKNVDDITTVESLQFGFGTIEAATNNFSAENKLGEGGFGEVFKGTLPSGQEIAVKRLSKSSGQGGEEFKNEVVVVAKLQHRNLVTLLGFCLQGEEKILVYEYIPNKSLDYTLFDPEKQRELDWRRRYKIIEGTARGIQYLHEDSRLRIIHRDLKASNILLDRDLNPKISDFGMARIFGVDQTQGNTDRIVGTYGYMAPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTDGAEDLLSYAWLLWKDGTPLELMDPILRESYNQNEIIKSIHIGLLCVQEDPEDRPTMATIVLMLDSNTVTLPTPKRPAFFIHSGTDTNMPKEQQFGQSITKSLPVSINDASISEMDPR 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02907 1166 Gene3D - 37 137 IPR038408 -
Viun2g02907 1166 Gene3D - 531 632 IPR038408 -
Viun2g02907 1166 Gene3D - 145 249 IPR038408 -
Viun2g02907 1166 Gene3D - 641 746 IPR038408 -
Viun2g02907 1166 SUPERFAMILY Protein kinase-like (PK-like) 827 1134 IPR011009 -
Viun2g02907 1166 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 531 631 - -
Viun2g02907 1166 FunFam cysteine-rich receptor-like protein kinase 10 917 1119 - -
Viun2g02907 1166 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 803 916 - -
Viun2g02907 1166 SMART serkin_6 351 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02907 1166 SMART serkin_6 841 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02907 1166 ProSitePatterns Protein kinases ATP-binding region signature. 847 869 IPR017441 GO:0005524
Viun2g02907 1166 FunFam Cysteine-rich receptor-like protein kinase 10 147 249 - -
Viun2g02907 1166 Gene3D Phosphorylase Kinase; domain 1 326 426 - -
Viun2g02907 1166 FunFam Cysteine-rich receptor-like protein kinase 10 314 426 - -
Viun2g02907 1166 SUPERFAMILY Protein kinase-like (PK-like) 340 515 IPR011009 -
Viun2g02907 1166 Pfam Protein tyrosine and serine/threonine kinase 843 1110 IPR001245 GO:0004672|GO:0006468
Viun2g02907 1166 Gene3D Phosphorylase Kinase; domain 1 801 916 - -
Viun2g02907 1166 ProSiteProfiles Protein kinase domain profile. 841 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02907 1166 ProSiteProfiles Gnk2-homologous domain profile. 531 632 IPR002902 -
Viun2g02907 1166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Viun2g02907 1166 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Viun2g02907 1166 Pfam Salt stress response/antifungal 538 629 IPR002902 -
Viun2g02907 1166 Pfam Salt stress response/antifungal 46 134 IPR002902 -
Viun2g02907 1166 Pfam Salt stress response/antifungal 650 744 IPR002902 -
Viun2g02907 1166 Pfam Salt stress response/antifungal 154 245 IPR002902 -
Viun2g02907 1166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
Viun2g02907 1166 FunFam Os07g0541700 protein 427 514 - -
Viun2g02907 1166 FunFam Cysteine-rich receptor-like protein kinase 25 640 746 - -
Viun2g02907 1166 ProSiteProfiles Protein kinase domain profile. 351 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02907 1166 ProSiteProfiles Gnk2-homologous domain profile. 638 746 IPR002902 -
Viun2g02907 1166 Pfam Protein kinase domain 352 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02907 1166 Gene3D Transferase(Phosphotransferase) domain 1 917 1120 - -
Viun2g02907 1166 Gene3D Transferase(Phosphotransferase) domain 1 427 517 - -
Viun2g02907 1166 ProSiteProfiles Gnk2-homologous domain profile. 33 137 IPR002902 -
Viun2g02907 1166 ProSiteProfiles Gnk2-homologous domain profile. 144 249 IPR002902 -
Viun2g02907 1166 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 548 1166 - -
Viun2g02907 1166 CDD STKc_IRAK 847 1113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02907 Viun-Chr2 33394975 33401453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02907 16 515 Receptor kinase-like Gene Family AT4G05200 43.264 7.59e-114 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun2g02907 PK_Tyr_Ser-Thr 2.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02907 - - vun:114173511 2282.68