Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02893 ATGGCGAGCACATCATTGCCATATCTATCACCATCATTATCATCAGTGGCAGCAATAGTAGTACTAGTGTTGGTTTCATGTGGAATATTAATTCACGAGTGCGAGGGACAGACCCAACAACCCAAGGCTTTGCCTCCAGCAGGGGAAACTTGTGACGGGATTTTCATTACCTATGACTTTCTGACTCGAACCAAGGAATTCCCTAAAGTGAAGAATGTGACGGCGCAGTCGTGGGCCTTCAGTTCCACCGCATCAGTTCTGAACACAGGCAAAGAAGTTGTTAAGGCGTGGAAGTTGTTCATAGAGTTTCAACATGACGAGATTCTAGTCTCCGTCGGTGGAGGCAGTCTAGAAGAGGCAACTGAGTTCCCCGCTTCGGTAGGAAATGGCACTACCTTTGTCGGAGCTTCTCAGCCAGACTTGGACAGCGCAATCAACACAGCTCAAGATTTAAACCAAATGCAAGCCATCATCGAGCTTAGTGGTACCATGTTTGGAGTAAAACCCCCTACGGTTCCTATGCCCAAAACCATCAAGTTGGTAAACGATGGTTACAAATGCCCCAAACCAACTACCCACAAGAGTTCCATGTATGCGTGCTGCAAAAAGGACCCTAAAGCGAAGAAAACACCTGCTAAGAAGACAAAATTCATGGCACGGCAAAAAGGGGATCTTCTGATATCCTATGACGTTACTCAAGTGTTTGACACTAATTATATGGTTCAGGTGGTGATAGATAATGAACACTTTTTGGGACGGTTGGATCATTGGAACTTGACGTGGGAGTGGACAAGAGGGGAATTTATATACTCTATGAAAGGTGCGTTCACCCGTGAGATAGAGTCCCTAGGTTGCGTCAATGGCGAGGCAGGAAAGTATTACGGCGGCTTGGATTTCTCTAAAGTGCTTAACTGTCAGAAGAATCCTGTAGTGAGTGACTTGCCTTCAGAGAAATACAACGACAGTGAACTTGGAAAGATACCTAACTGTTGCAAAAACGGAAATCTTTTACCCGTCCTCATGGACCCCAGCAAATCCAAGGCTGCTTTCACAATGCTAGTGTACAAAATCCCACCGGATTCAAACAAAACGGCAATTTACCCACCGGAGAAATGGCAAATAACGGGCATTCTCAACCCGAATTACCAATGTGGGTTACCCAGAAGAGTGGAGCCTGCTCGATTCCCAGACTCAAGGGGACTCGAAGCAGAGGTTATTGCCTTCGCAAGTTGGCAAATAGTCTGCAATATCACTAAGCCAACCAAAAGGAGCACTCGGTGTTGTGTTTCTTTCTCCTCTTATTACAACGACTCCGTAATCCCTTGCAACACATGTGCCTGTGGCTGTGACACCACAAAGACCCATAAATGCAATCCCAAATCTCCGGCAATGCTTCTCCCTCCGGAAGCTCTTCTTGTACCCCATGAAAACAGGTCTACAAAGACGGTTGCTTGGGCCAAAATGAAGCATTTTACAATCCCCAAAAGATTACCCTGCGGTGACAACTGCGGAGTGAGCATAAACTGGCACGTGGTTTCCGACTACAAAGGTGGGTGGAGTGCTCGAATCACTCTGTTCAACTGGATGCATTCCCAGTTTGAGAATTGGTTCACCGCGCTCCAATTCAAGAAGACTCCTCGCGGCTACCAAGCAGCGTATTCTTTTAATGCAACCACCATTCCAACGCTGAACCATACTATTTTCTTGCAAGGATTTATAGGAGCAAACTATCTCATAGGTTTGGACAATAAATCAAACCCACATGTTCCCGGAAAACAACAATCCGTTATTTCCTTTACCAAGAAGTATTCACCAAATATCGAAGTTGCAGAAGGAGATGGGTTCCCTTCCAAGGTCATTTTTAACGGTGAAGAGTGTTCCCTTCCTACCCGAATCCCTCTCAAAAGTGGAAACCAACCTAATGTTGTTGTAGATTTAGCGTACCAACTTTTGCTTTTCGCTTTAGCTTTTACATTCAGTCATGTGCTGTAA 1992 0.4548 MASTSLPYLSPSLSSVAAIVVLVLVSCGILIHECEGQTQQPKALPPAGETCDGIFITYDFLTRTKEFPKVKNVTAQSWAFSSTASVLNTGKEVVKAWKLFIEFQHDEILVSVGGGSLEEATEFPASVGNGTTFVGASQPDLDSAINTAQDLNQMQAIIELSGTMFGVKPPTVPMPKTIKLVNDGYKCPKPTTHKSSMYACCKKDPKAKKTPAKKTKFMARQKGDLLISYDVTQVFDTNYMVQVVIDNEHFLGRLDHWNLTWEWTRGEFIYSMKGAFTREIESLGCVNGEAGKYYGGLDFSKVLNCQKNPVVSDLPSEKYNDSELGKIPNCCKNGNLLPVLMDPSKSKAAFTMLVYKIPPDSNKTAIYPPEKWQITGILNPNYQCGLPRRVEPARFPDSRGLEAEVIAFASWQIVCNITKPTKRSTRCCVSFSSYYNDSVIPCNTCACGCDTTKTHKCNPKSPAMLLPPEALLVPHENRSTKTVAWAKMKHFTIPKRLPCGDNCGVSINWHVVSDYKGGWSARITLFNWMHSQFENWFTALQFKKTPRGYQAAYSFNATTIPTLNHTIFLQGFIGANYLIGLDNKSNPHVPGKQQSVISFTKKYSPNIEVAEGDGFPSKVIFNGEECSLPTRIPLKSGNQPNVVVDLAYQLLLFALAFTFSHVL 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02893 663 Pfam COBRA-like protein 239 418 IPR006918 GO:0010215|GO:0016020
Viun2g02893 663 PANTHER COBRA-LIKE PROTEIN 7 20 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02893 Viun-Chr2 33322945 33325101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02893 45 636 COBRA Gene Family AT4G27110 53.859 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02893 - - gmx:100799716 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02893 2 33322945 33325101 Viun2g02893 2 33322945 33325101 ECH