Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02886 ATGGGTACGATGCTACAAACCATTCTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTCTTTCTATTCAAACCATGGCGCTTCTTTTTCTCTCAGCGTTTCCTCTCCTCTATAAAGGGCGAGCTGGAGCGCCCCCTTGTTACCGACGAAGAGGATGCAAATGCGTCGCCGTTAAATCAGATCAATGAATTGCCTCGAGATTATGATCTCGAGGGTGCATGTTATCCCTCTGAAGCTCATTTTCGCTCTCCTCGGACCCATGGCCAAGGGCTTGTTCATAAGCAAAGGGTTCAAAACCTTTCTGTTCCACCTACTATACACCTGGGTGGTGATGCTTTGGTCGTGGATGTGATCTCTGATCCTTCCTCTGACGATGTTGATGTTGGTCAAACCCTTAGGCTTTCCACAGCTCAATTAGCTCAATTTCAAAAGCAGGGAACGACCAATGTTCGAAATGATAGACTGCAGGACTTAGTGCAATGGAATATCTCCGATCAAAGAAGTTGTCTCACTCTGGAGGTTATCAGTGGCCCTTCTCGGGGGCTTCGTTGTTCTGTACAGTCGGTCAATTCCTCTCGTCTACCACTAACCTTGGGAAGAGTCTCTCCGAGTGATTTGTTGATAAAGGATTCAGAAGTGTCAGGAAAGCACGCGATGATAAAGTGGAATTTGGATAAAATGAAATGGGAGTTGGTGGATATGGGTAGTCTGAATGGAACACTATTGAATTCTAAGCCAATCAACCACCCAGACACTGAAAGTAGGAATTGGGGAAATCCAATGAATCTTGCTAATGGAGATGTCATAACACTTGGGACAACATCAAAAGTAATGGTCCATATTACTTCCCAAACTCAGCATCAGATACCCTTTGGAGTTGGCATGGCATCAGATCCAATGGCTATGCGTCGAGGAGGAAAAAGGTTTCCCATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGGCTGGATCAGTTTGGACTTTTTGGCGTTTGTGATGGTCATGGTGGAGATGGGGCCGCCAAATCTGCTAGCAAACTTTTTCCTGAGGTAATTGCTAGTATATTATCGGATTCATCAAGGAGGGAGAGAGTTTTGTCACTCGGTGATGCTTCAGATATTCTTCGAGATGCATTTTCTCAAACGGAAGCTCATATGAATCACCATTATGAGGGATGTACAGCGACAGTGCTTCTGGTGTGGACTGATGGTGAAGAAAATTTCTTTGCACAATGTGCTAATGTGGGGGACTCCACCTGTATTATGAGTTTGAATGGGGAGCAAATCAAGATGACAGAAGATCACAAGATAACGAATTATTCTGAAAGACTCAGAATCGAAGAGACAGGCGAGCCCTTAAAAGAAGGGGAAACACGTCTATATGGTATAAATCTGGCAAGAATGCTTGGGGACAAATTTCTGAAACAGCAGGATACCCGGTTCAGTTCAGAACCTTACATAAGTGAAGTTGTGCACATTGATCAAGCAAGCAAAGCTTTTGCTATTCTAGCTAGTGATGGGCTGTGGGATGTCATCAGCGTGAAGAAGGCAATTCAGCTTGTGTTGCAGATGAAGGAGAAATGCTATTCAGAGAGAGAGAATATAGCAGAAAAAGCTGCAAGCTTGTTGTTGAATGAGGCTAAAACGCTCAGAACAAAGGATAATACCTGTGTAATTTTCTTAGATTTTGATACCTTCAACAAATTCTCTTGTAAAGTTGAATCCTAG 1746 0.4359 MGTMLQTILTVLLLLMLLLIIIFLFFLFKPWRFFFSQRFLSSIKGELERPLVTDEEDANASPLNQINELPRDYDLEGACYPSEAHFRSPRTHGQGLVHKQRVQNLSVPPTIHLGGDALVVDVISDPSSDDVDVGQTLRLSTAQLAQFQKQGTTNVRNDRLQDLVQWNISDQRSCLTLEVISGPSRGLRCSVQSVNSSRLPLTLGRVSPSDLLIKDSEVSGKHAMIKWNLDKMKWELVDMGSLNGTLLNSKPINHPDTESRNWGNPMNLANGDVITLGTTSKVMVHITSQTQHQIPFGVGMASDPMAMRRGGKRFPMEDVCYYQWPLPGLDQFGLFGVCDGHGGDGAAKSASKLFPEVIASILSDSSRRERVLSLGDASDILRDAFSQTEAHMNHHYEGCTATVLLVWTDGEENFFAQCANVGDSTCIMSLNGEQIKMTEDHKITNYSERLRIEETGEPLKEGETRLYGINLARMLGDKFLKQQDTRFSSEPYISEVVHIDQASKAFAILASDGLWDVISVKKAIQLVLQMKEKCYSERENIAEKAASLLLNEAKTLRTKDNTCVIFLDFDTFNKFSCKVES 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02886 581 Gene3D - 305 578 IPR036457 -
Viun2g02886 581 SUPERFAMILY PP2C-like 310 570 IPR036457 -
Viun2g02886 581 CDD PP2Cc 305 569 IPR001932 -
Viun2g02886 581 CDD FHA_PP2C70-like 175 285 - -
Viun2g02886 581 FunFam Protein phosphatase 2C 70 170 304 - -
Viun2g02886 581 FunFam Protein phosphatase 2C 70 305 576 - -
Viun2g02886 581 Gene3D - 169 304 - -
Viun2g02886 581 ProSiteProfiles Forkhead-associated (FHA) domain profile. 201 252 IPR000253 GO:0005515
Viun2g02886 581 SMART FHA_2 200 252 IPR000253 GO:0005515
Viun2g02886 581 Pfam FHA domain 202 277 IPR000253 GO:0005515
Viun2g02886 581 ProSiteProfiles PPM-type phosphatase domain profile. 297 569 IPR001932 -
Viun2g02886 581 ProSitePatterns PPM-type phosphatase domain signature. 334 342 IPR000222 GO:0043169
Viun2g02886 581 SUPERFAMILY SMAD/FHA domain 173 284 IPR008984 GO:0005515
Viun2g02886 581 PANTHER PROTEIN PHOSPHATASE 2C 286 565 IPR015655 GO:0004722|GO:0006470
Viun2g02886 581 Pfam Protein phosphatase 2C 304 562 IPR001932 -
Viun2g02886 581 SMART PP2C_4 291 567 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02886 Viun-Chr2 33233459 33239865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02886 26 571 PP2C-type Phosphatase Gene Family AT5G19280 58.435 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02886 K01090 - gmx:100170642 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02886 2 33233459 33239865 Viun2g02886 2 33233459 33239865 ECH