Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02878 ATGGGTTCTGAGACTTTTATTGAAGTGATATTAGCAATCCTTATACCTCCTCTTGGTGTTTTCCTCCGTTATGGCTGTGGTATTGAGTTCTGGATAGATCTGGTGCTGACGCTGCTGGGATACCTTCCTGGGATGATATATGCCATATATGTACTGGTTGCGTGA 165 0.4364 MGSETFIEVILAILIPPLGVFLRYGCGIEFWIDLVLTLLGYLPGMIYAIYVLVA 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02878 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
Viun2g02878 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 2 53 IPR000612 GO:0016020
Viun2g02878 54 Pfam Proteolipid membrane potential modulator 6 53 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02878 Viun-Chr2 33198007 33198507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02878 1 54 RCI2 Gene Family AT2G38905 79.630 1.15e-26 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02878 - - nnu:104594760 103.99