Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02869 ATGGCTATCCAAGTTCTTCTCTTTGTTGCCTTCCTTCTATGTTCCTTTGCTTCCGGGAACGATGCTAACTCAATCCAACTGGGGTCCAGCATCGTGGCTGGAACCAATTCATCTTGGCGATCATCTTCTGGGGATTATGCCTTTGGATTCTACAACCTTATTGGTGGTCGCTATCTTGTTGGAATCTGGTTTGACAAAATTCCTGATAGAACATTGGTTTGGTCTGCAAACCGTGACAATCCAGTAGAAATTGGATCTTCCATCAATCTCACACGAAGTGGCCAATTTGTGCTCCAACCTCTCAACGGGACTTCATTCCCCATCTACGAAGGAACAAACACTGCATCAGCAGTGATGCAGAATGACGGGAATTTCGTCTTGAAGAATTCACTTTCCAACGTTATATGGGAGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACCTTGAATACCAGTCGGAAGCTCTACTCCAATGCCAATGGATCAGTTGACTACTCAACTGGACAATACAGTTTGGAGATTCAGCAGTCTGATGGCAACATTCTTCTTAAAGCTCATCGCTTCACGGATTCTGCCTACTGGTGGAGTGACACTGTCCAAAACAAAGGTGTGAGAATTATTTTTGATAACAAAACAGCTTTTCTTTACGCGGTCAATGCCACCCACCAAATTATATTTAACATGACCACAGAGGTAGAGGGTGCAATTGAAGATTACTATCACCGTAATGGAAATGAGTGGAGATCTGTGTGGAAGGCAGTAACAGAGCCTTGCACTGTGACTGCCCTTTGTGGGGTGTATGGCTTTTGCAATACAACTGATTCTGAGAACCATACATACACCTGTGGATGCTTACCTGGTTATACTCCCTTGGATCCAACAGCACCCTCAAAGGGGTGCTATCTCAGCGAGGTCATGGACTTGTGTGCTGCAAATTCTTCTGCCTCTAACCTTATGGTAGAAGTGAAAGAGGTTCAACATGCTGATATACCAAACCATGGCTATGTTTTTTTTGATCTACAAGTCTTAACTAGCATGGATCAGGAAAGATGCAAGAAAGAATTGTTGGATGATTGTCTCTGCATGGTTGCTGTTTCACTTGGCAATAATTGCTATAAGAAAAAATGGCCAATTATAAATGCCGCAAGAATCTTCCCTAAAACTAGTAATAGTGTGATGCTGGTTAAAGTTCCTGTTGTTGCCAATGATAAGGAGGGATCGTCTTTGGCTATTTTGATAGTGGCTCTCGTCTCTTGCTCACTACTTGCTGCATTGTTTGTAGCTACTGCCATTTATCATCACCCCGTTTGTCGGCATCTCATGCACAAACAAGCACCACCAAAGCCAAAGACAAAGCCTGTGGATATCAATCTAAAGGTATTTTCATTCCAACAGCTGAGAGAAGCAACTAATGGATTCAAAGACAAACTTGGTCGAGGAGCCTATGGTACGGTGTATGTTATTGCTCTCACTCATCACAGAAATCTTGTTAGCTTATTAGGATTTTGCAATGAGCAGAGTCATAGGCTTTTGGTTTATGAGAAAATGGAAAAAGGAACACTATCCAACTTCCTTTTCGATGAAGGGGATAAACCCAGCTGGGAAAGTAGAGTGAGAATTGTGGTTGAAATTGCAAGAGGCTTGCTATATCTGCATGAAGAGTGTGACCATCAAATCATCCACTGTGACATAAAGCCTCAGAATGTTCTGCTTGACTCTAATTACACTGCAAAGATCTCAGATTTTGGACTGGCAAAGTTGCTAATGAAAGATAAAACTCGAACAAACACCAATGCCAGAGGGACAGTGGGATATATGGCACCAGAATGGCTCAAAAATGCACCTGTTACTGCAAAGGTTGATATCTACAGCTTTGGTGTCATGTTGTTGGAAATCATATTTTGCAGAAAACACATTGAGTTGCATCAAATTAAGGATGAAACAATGGGTGATGACTTGATACTAATAGATTGGGTCTTGTATCTGGCAAAACAAAACAATTTAAGAGCCGCAATGATTCATCATCTCGAAGTTGAAAGTGATATCAGGAGGTTTGAAAGAATGACCATGGTTGGATTATGGTGCGTAAATCCCAATCCAACTCTTCGACCATCTATGAAAACTGTGGTACAGATGTTGGAAGGAAATGTCGAAGTGGGAGTCCCAACAATCAACTCATAG 2190 0.4192 MAIQVLLFVAFLLCSFASGNDANSIQLGSSIVAGTNSSWRSSSGDYAFGFYNLIGGRYLVGIWFDKIPDRTLVWSANRDNPVEIGSSINLTRSGQFVLQPLNGTSFPIYEGTNTASAVMQNDGNFVLKNSLSNVIWESFDSPTDTLLLGQTLNTSRKLYSNANGSVDYSTGQYSLEIQQSDGNILLKAHRFTDSAYWWSDTVQNKGVRIIFDNKTAFLYAVNATHQIIFNMTTEVEGAIEDYYHRNGNEWRSVWKAVTEPCTVTALCGVYGFCNTTDSENHTYTCGCLPGYTPLDPTAPSKGCYLSEVMDLCAANSSASNLMVEVKEVQHADIPNHGYVFFDLQVLTSMDQERCKKELLDDCLCMVAVSLGNNCYKKKWPIINAARIFPKTSNSVMLVKVPVVANDKEGSSLAILIVALVSCSLLAALFVATAIYHHPVCRHLMHKQAPPKPKTKPVDINLKVFSFQQLREATNGFKDKLGRGAYGTVYVIALTHHRNLVSLLGFCNEQSHRLLVYEKMEKGTLSNFLFDEGDKPSWESRVRIVVEIARGLLYLHEECDHQIIHCDIKPQNVLLDSNYTAKISDFGLAKLLMKDKTRTNTNARGTVGYMAPEWLKNAPVTAKVDIYSFGVMLLEIIFCRKHIELHQIKDETMGDDLILIDWVLYLAKQNNLRAAMIHHLEVESDIRRFERMTMVGLWCVNPNPTLRPSMKTVVQMLEGNVEVGVPTINS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02869 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Viun2g02869 729 Gene3D Phosphorylase Kinase; domain 1 486 519 - -
Viun2g02869 729 SMART blect_4 30 142 IPR001480 -
Viun2g02869 729 SUPERFAMILY Protein kinase-like (PK-like) 454 717 IPR011009 -
Viun2g02869 729 ProSiteProfiles Bulb-type lectin domain profile. 24 140 IPR001480 -
Viun2g02869 729 Pfam Protein kinase domain 489 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02869 729 Gene3D Transferase(Phosphotransferase) domain 1 520 723 - -
Viun2g02869 729 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 519 724 - -
Viun2g02869 729 Gene3D - 20 139 IPR036426 -
Viun2g02869 729 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 201 IPR036426 -
Viun2g02869 729 Pfam D-mannose binding lectin 71 157 IPR001480 -
Viun2g02869 729 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 489 724 - -
Viun2g02869 729 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 20 140 - -
Viun2g02869 729 Gene3D - 140 234 IPR036426 -
Viun2g02869 729 ProSiteProfiles Protein kinase domain profile. 414 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02869 729 Pfam S-locus glycoprotein domain 213 293 IPR000858 GO:0048544
Viun2g02869 729 PIRSF SRK 488 729 IPR024171 GO:0004674
Viun2g02869 729 PIRSF SRK 1 490 IPR024171 GO:0004674
Viun2g02869 729 SMART serkin_6 474 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02869 729 CDD B_lectin 41 142 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02869 Viun-Chr2 33132354 33134696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02869 380 721 Receptor kinase-like Gene Family AT5G55830 32.283 2.99e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun2g02869 Pkinase 1.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02869 - - pvu:PHAVU_002G046100g 1215.68