Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g02868 | ATGTCTTTGCCTATCTTTCTCCCTTCCATTTTCATACTACTTTCACTTCTGAATGGATTCCATGCCATTGTACAACCAAACACCAGCATCACTGCTGGATCAAACTCTACATGGAAGTCACCCTCGGGTCATTTTGAATTTGGATTCCTCCATCTTCCCAGTGGTCTCTTTCTTTTGGGAATATGGTTTGCGAGAATCTCAGATATAACACTCGCATGGTACCTCTCTCCTCCTGTGGAACCAAATTCCCAAATCCAATTCACTTCTGCAGGAAACCTTGTGGTTGTACACCCAAATGGGACTACTGCTAACACCATATACGATTCAGAAGAAGGTGCTGCTGCAACTTCTGCTGACATGCAAGATGATGGCAATTTTGTCATCAAGGACTCCAAATTAGTATCTGTATGGCAGAGTTTCAACTATCCAACCAACACTATCTTACCGGGCCAAACATTGCTCAGTACTAAAACCCTCTATTCCAAGGGCAAAGGACCTTCAAACTACTCGTTGGGAAGTTTCCTATTACAAATGCAAGATGATGGCGACTGGGTGCTCAAAGCGTACCAGTGGTTAGACCCTGCATACTGGTACATTTCAACCATAACCTCCAATGTGACTTTGGTGTTTAATGCCACCACTGCTCTCATGTACCTTGTCGCCGGCACCGGGAACATCTACTCTATAACCAACACCACTCCAACCCCGGTGGAGGATTACTATCACCGTGCTACAATAGATGAGAATGGGAATTTCCAGCAATACGCTTATCACAAGAGGAATGGGACCGGTTGGAGGAGGGTTTGGAGAGCTGTGGAGGATCCCTGCAGAGTGAATGCTGTCTGTGGTGTGTATGGCTTGTGCAGTTCTCCTGACAATGAATCAGTAAAGTGTGAGTGTATTCCAGGTTATATCCCTTTCGATGATCGAGATATTTCAAAAGGGTGTCATCCACCAGCTGTCATAAATTACTGTGCAGAGAACAACTTCAAACTCCAGGTCTTTGACGACACTGATTTCCATTTTAATACTCATCTTGTTAGCTTAGCTGGTGTTGACTTCGAAAGTTGTAAGAAGGATGTAATAGATGATTGTAACATTGTTGCTGCAACTTATGACCATTCCACCTCCACATGTGCCAAGAAGAGACTGCCCTTACTGAATGCTAGAAATAGCTCTTCTTCAAAGGGACTGAAAGCACTGCTTAAGGTTGCTCACAGGATTGAATCTGGAACATATACTAAGAAGAAAATTTTTAATGTAAAAATCCTTTTAAAGGTTCTTGTTGCAGTTACTGCAACTCTTGCCTGTTTCTTTGGTGCCCTTGCTGTCTACTATCATCCTTTCACTCGGAAACTAACAATAAGAAAGAAGCATCTGAATGCAACAGCTATGGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGTGTGAAGCAACAAAGGGATTTACTAAGATTCTTGGAAAGGGAGCTTCTGGCAGAGTCTATCGTGGTGCTCTAGTGATAGATGATGCAGAGATTGATGTTGCAGTAAAGAAACTGGAAAAGAAAATAGACAAAAGTGAGACTGAATTCACGACTGAGCTAAAAATTATTGGCCGTACTCATCATAGAAATTTGGTGAGGCTTTTGGGGTTTTGCATTGAGAGTAGCCATCGAATTCTTGTGTATGAGTTGATGCCACACGGTGCCCTCTCTAGTTATTTGTTTGGAGAGGGAGAAAGGCCTGAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTCGCAAGAGGGTTGCTATACTTGCACGAAGAGTGCAACACCCAAATCATACATTGTGACATAAAGCCCGAAAATGTGTTACTTGATGCCAATTACACACCAAAGATTGCAGATTTTGGACTGTCGAAGCTTTTGAACAAAGATCAAACTAGAACAAACACTAACTTAAGAGGAACGATGGGATACCTGGCACCTGAATGGCTAAGGAGTGCACCAGTAACTGCGAAAGTTGACATATACAGTTTTGGGGTTATGTTATTGGAGATTATTTGCTGCAGGAGGCACGTTGAGATTTGTGAGGATGGAAAAGACAGTGAAGATTATGATTTGGTTCTTTCAAATTTTGTTTTAAGGTGTGTGGTGTGTAGGCAACTAGAGGTAGTGGTGAGAGATGACACAGAAGTGCTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGATTGGACTGTGGTGTGTTCATCCAAATCCTGCTTTAAGACCTTCAATGAAGCACGTAATGCAAATGCTAGATGGAACAGTGGAAGTTGGTGTTCCTCCTTTGGTTTATGAGCAGATCATGGCCTGTAGTTTATCACTGCAGTGCTAA | 2352 | 0.4264 | MSLPIFLPSIFILLSLLNGFHAIVQPNTSITAGSNSTWKSPSGHFEFGFLHLPSGLFLLGIWFARISDITLAWYLSPPVEPNSQIQFTSAGNLVVVHPNGTTANTIYDSEEGAAATSADMQDDGNFVIKDSKLVSVWQSFNYPTNTILPGQTLLSTKTLYSKGKGPSNYSLGSFLLQMQDDGDWVLKAYQWLDPAYWYISTITSNVTLVFNATTALMYLVAGTGNIYSITNTTPTPVEDYYHRATIDENGNFQQYAYHKRNGTGWRRVWRAVEDPCRVNAVCGVYGLCSSPDNESVKCECIPGYIPFDDRDISKGCHPPAVINYCAENNFKLQVFDDTDFHFNTHLVSLAGVDFESCKKDVIDDCNIVAATYDHSTSTCAKKRLPLLNARNSSSSKGLKALLKVAHRIESGTYTKKKIFNVKILLKVLVAVTATLACFFGALAVYYHPFTRKLTIRKKHLNATAMGINFREFTFQELCEATKGFTKILGKGASGRVYRGALVIDDAEIDVAVKKLEKKIDKSETEFTTELKIIGRTHHRNLVRLLGFCIESSHRILVYELMPHGALSSYLFGEGERPEWGQRIEMALGVARGLLYLHEECNTQIIHCDIKPENVLLDANYTPKIADFGLSKLLNKDQTRTNTNLRGTMGYLAPEWLRSAPVTAKVDIYSFGVMLLEIICCRRHVEICEDGKDSEDYDLVLSNFVLRCVVCRQLEVVVRDDTEVLNDFKRFEEMALIGLWCVHPNPALRPSMKHVMQMLDGTVEVGVPPLVYEQIMACSLSLQC | 783 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g02868 | 783 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 561 | 766 | - | - | |
Viun2g02868 | 783 | Pfam | Protein kinase domain | 486 | 756 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02868 | 783 | SUPERFAMILY | Protein kinase-like (PK-like) | 464 | 758 | IPR011009 | - | |
Viun2g02868 | 783 | ProSiteProfiles | Protein kinase domain profile. | 482 | 762 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02868 | 783 | Pfam | S-locus glycoprotein domain | 238 | 306 | IPR000858 | GO:0048544 | |
Viun2g02868 | 783 | ProSiteProfiles | Bulb-type lectin domain profile. | 21 | 141 | IPR001480 | - | |
Viun2g02868 | 783 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 604 | 616 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g02868 | 783 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 57 | 201 | IPR036426 | - | |
Viun2g02868 | 783 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 31 | 768 | - | - | |
Viun2g02868 | 783 | Gene3D | Transferase(Phosphotransferase) domain 1 | 561 | 764 | - | - | |
Viun2g02868 | 783 | Gene3D | - | 18 | 142 | IPR036426 | - | |
Viun2g02868 | 783 | Gene3D | Phosphorylase Kinase; domain 1 | 455 | 560 | - | - | |
Viun2g02868 | 783 | SMART | serkin_6 | 482 | 758 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02868 | 783 | ProSitePatterns | Protein kinases ATP-binding region signature. | 488 | 514 | IPR017441 | GO:0005524 | |
Viun2g02868 | 783 | Gene3D | - | 143 | 282 | - | - | |
Viun2g02868 | 783 | PIRSF | SRK | 1 | 779 | IPR024171 | GO:0004674 | |
Viun2g02868 | 783 | Pfam | D-mannose binding lectin | 78 | 157 | IPR001480 | - | |
Viun2g02868 | 783 | CDD | STKc_IRAK | 488 | 760 | - | - | |
Viun2g02868 | 783 | SMART | blect_4 | 29 | 143 | IPR001480 | - | |
Viun2g02868 | 783 | FunFam | S-receptor-like serine/threonine-protein kinase | 451 | 560 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g02868 | Viun-Chr2 | 33128909 | 33131320 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g02868 | 415 | 781 | Receptor kinase-like Gene Family | AT5G55830 | 36.412 | 2.45e-64 | 226 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Viun2g02868 | Pkinase | 3.6e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g02868 | - | - | gmx:102662509 | 1181.01 |