Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02867 ATGGCTATCCAATTTCTTCTCTCTGTTGCCTTCCTTCTATGTTCCTTTACTTCTGGGAATCATGCTAACTCAATTCAACTGGGTTCCACCATCGTCGCTGGCACCAATTCATCCTGGCTATCATCCTCCGGGGATTACGCCTTTGGATTCTACCACCTTACCACTGGCCGCTATCTTGTTGGAATCTGGTTTGACAAAATTCCTGATAGAACATTGGTTTGGTCTGCAAACCGTGACAACCCAGTTGAAATTGGATCATCCATCAATCTCACACGAAGTGGCCAATTTGTGCTCCAACCTCTCAACGGGGATTCATTCCCCATATACGAAGGAACAAACGCTGCATCAGCAGAAATGAACGATGACGGGAATTTCGTCTTGAAGAATTCTCTTTCCAACGTTATATGGCAGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACCTTCAATACCAGTCGGAAGCTCTACTCCAATGCCAATGGATCAGTTGACTACTCAACTGGACAATACAGTTTGGAGATTCAGCAGTCTGATGGCAACATTCTTCTTAAAGCTCATCGCTTCACGGATTCTGCCTACTGGTGGAGTGGCACTGTCCAAAACACAGGCGTGAGAATTATTTTTAACAGCACAACAGCTTTTCTTTACGCGGTCAACGCCACCAATCAAATTATATATTACATGACTACAGAGGCAGAGGGTGCAATCCAAGATTACTATCACCGTGTGGTGGTGGATGACAAGGGAAACTTTCAGAAGTGGATTTACCTTAAAGAGAATGGAAATGAGTGGAGATCAGTGTGGAAGGCAGTAACAGAGCCTTGCACTGTGACGGCCCTTTGTGGGGTGTATGGCTTTTGCAATACAACTGATTCTGAGAACCATACATACACCTGTGGATGCTTACCTGGTTATACTCCTTTGGATCCAACAGCACCCTCCAAGGGGTGCTATCTCAGTGAGGTCATGGACTTGTGTGCTGCAAATTCTTCTGCCTCTAACTTTATGGTAGAAGTGAAAGAGATTCAACGTGCTGATATACCAACCGAAGGCTACGTTTTTTTTGATCAACGAGTCTTGAATAACATGGATCTGGAAAGATGCAAGAAAGAATTGATGGATGATTGTCTCAGCATGGTTTCTGTTTTAATTGGCAGTGATTGCCATAAGAAAAAATGGCCAATTATAAATGCCGCGAGAATCATCCCTAAAACTAATAATAGTGTGATGCTGGTTAAAGTTCCTCTGGTTGCCAATGATAAAAAATCATCTTCTTTGGTTGTTCTGATAGCGGCTCTCATCTCTTGTTCATTACTTGCTTCATTGTTTGTAGCTACTACCATATATCATCACCCCGTTTGTCTGCATAAAAAAGCACCACCAAAGCCAAAGCCAAAGCCGATGGATATCAATCTGAAGGCATTTTCATTCCAACAGCTGAGAGAAGCAACTAATGGATTCAAAGAAAAACTTGGTCGAGGTGCCTATGGTACGGTGTATGGTGGGATTTTAAACATGGAAGGTCAACAGGTTCAGGTTGCTGTCAAACAACTGGAGCAAGTAGAAGACCAAGGTGATAAAGAATTTGTGACAGAAGTTCAAGTTATTGCTCTCACTCATCACAGAAATCTTGTTGGCTTATTGGGATTTTGCAATGAGCAGAGTCACAGGCTTTTGGTTTATGAGAAAATGGAAAACGGAACACTATCCAACTTCCTTTTCGATGAAGGCGATAAACCCAGCTGGGAAAGTAGAGTGAGAATTGTGGTTGAAATTGCAAGAGGCTTGCTATATCTGCATGAAGATTGTGACCATCAAATCATCCACTGTGACATAAAGCCTCAGAATGTTCTGCTTGACTCTAATTACACTGCAAAGATCTCAGATTTTGGACTGGCAAAGTTGCTAATGAAAGATAAAACTCGAACAAACACCAATGCTAGAGGGACAGTGGGATATATGGCACCAGAATGGCTCAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGTGTCATGTTGCTGGAAATCATATTTTGCAGAAAACATATAGAGTTGCATCAAATTGAGGATGAAACAATGGGTGATGACTTGATACTAATAGATTGGGTCTTGTATCTGGCAAAACAAAACAATTTAAGAGCCGCAATGATTCATCATCTCGAAGTTGAAAGTGATATCAGGAGGTTTGAAAGAATGGCCATGGTTGGATTATGGTGCGTAAATCCCAATCCAGCTCTTCGACCATCTATGAAAACTGTAGTACAGATGTTGGAAGGAAATGTGGAAGTGGGAGTCCCATCAATCGACTCATAG 2334 0.4212 MAIQFLLSVAFLLCSFTSGNHANSIQLGSTIVAGTNSSWLSSSGDYAFGFYHLTTGRYLVGIWFDKIPDRTLVWSANRDNPVEIGSSINLTRSGQFVLQPLNGDSFPIYEGTNAASAEMNDDGNFVLKNSLSNVIWQSFDSPTDTLLLGQTFNTSRKLYSNANGSVDYSTGQYSLEIQQSDGNILLKAHRFTDSAYWWSGTVQNTGVRIIFNSTTAFLYAVNATNQIIYYMTTEAEGAIQDYYHRVVVDDKGNFQKWIYLKENGNEWRSVWKAVTEPCTVTALCGVYGFCNTTDSENHTYTCGCLPGYTPLDPTAPSKGCYLSEVMDLCAANSSASNFMVEVKEIQRADIPTEGYVFFDQRVLNNMDLERCKKELMDDCLSMVSVLIGSDCHKKKWPIINAARIIPKTNNSVMLVKVPLVANDKKSSSLVVLIAALISCSLLASLFVATTIYHHPVCLHKKAPPKPKPKPMDINLKAFSFQQLREATNGFKEKLGRGAYGTVYGGILNMEGQQVQVAVKQLEQVEDQGDKEFVTEVQVIALTHHRNLVGLLGFCNEQSHRLLVYEKMENGTLSNFLFDEGDKPSWESRVRIVVEIARGLLYLHEDCDHQIIHCDIKPQNVLLDSNYTAKISDFGLAKLLMKDKTRTNTNARGTVGYMAPEWLKNAPVTTKVDIYSFGVMLLEIIFCRKHIELHQIEDETMGDDLILIDWVLYLAKQNNLRAAMIHHLEVESDIRRFERMAMVGLWCVNPNPALRPSMKTVVQMLEGNVEVGVPSIDS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02867 777 Gene3D - 20 141 IPR036426 -
Viun2g02867 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 201 IPR036426 -
Viun2g02867 777 Gene3D Transferase(Phosphotransferase) domain 1 567 770 - -
Viun2g02867 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 772 - -
Viun2g02867 777 ProSiteProfiles Protein kinase domain profile. 488 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02867 777 ProSitePatterns Protein kinases ATP-binding region signature. 494 519 IPR017441 GO:0005524
Viun2g02867 777 CDD B_lectin 34 142 IPR001480 -
Viun2g02867 777 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 772 - -
Viun2g02867 777 FunFam S-receptor-like serine/threonine-protein kinase 459 566 - -
Viun2g02867 777 Pfam Protein kinase domain 491 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02867 777 Pfam S-locus glycoprotein domain 225 310 IPR000858 GO:0048544
Viun2g02867 777 Gene3D - 143 282 - -
Viun2g02867 777 SUPERFAMILY Protein kinase-like (PK-like) 467 765 IPR011009 -
Viun2g02867 777 SMART serkin_6 488 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02867 777 SMART blect_4 30 142 IPR001480 -
Viun2g02867 777 Pfam D-mannose binding lectin 71 157 IPR001480 -
Viun2g02867 777 CDD STKc_IRAK 494 766 - -
Viun2g02867 777 ProSiteProfiles Bulb-type lectin domain profile. 22 140 IPR001480 -
Viun2g02867 777 Gene3D Phosphorylase Kinase; domain 1 463 565 - -
Viun2g02867 777 PIRSF SRK 1 777 IPR024171 GO:0004674
Viun2g02867 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Viun2g02867 777 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 19 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02867 Viun-Chr2 33124361 33126704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02867 476 772 Receptor kinase-like Gene Family AT3G53380 39.667 5.92e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun2g02867 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02867 - - pvu:PHAVU_002G046100g 1323.92