Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02866 ATGTCTTTGCCTATCTTTCTCCCTTCCATTTTCATACTACTTTCACTTCTGAATGGATTCCATGCCATTGTACAACCAAACACCAGCATAACTGCTGGATCAAACTCTACATGGAAGTCACCCTCGGATGATTTTGAATTTGGATTCCTCCATCTTCCCAGTGGTCTCTTTCTTGTGGGAATATGGTTTGGGAGAATCTCAGATATAACACTCGCATGGTACCTCTCTCCCCCTGTGGAACAAAATTCCCAAATTCAATTCACTTCTGCAGGAAACCTTGTGGTGGTACACCCAAACGGAACCACTGCAAACACCATATACAATTCAGCAGAGGGCGATGCTGCAACTTCTGCTGACATGCAAGATGATGGCAATTTTGTCATCAACGGCTCCAACTTAGTATCTGTGTGGCAGAGTTTCAACTCTCCAACCAACACCATCTTACCGGGCCAAACCTTGCTGAGTACTAAAACCCTCTTTTCCAAGGGGAAAGGACTTTCAAACTACTCGTTGGGAAGTTTCATGCTACAAATGCAAGATGATGGCAACTTGTTGCTCAGAGCTTACCAATGGGATGACCCTGCGTACTGGTACATTTCAACCACCACCCCAAATGTGACTTTGGTGTTTAATTCTACCACTGCTCTCATGTACCTTATCACCGGCACCGGGAACATCTACTCTATAACCAACACCACTCCAACCCCGGTGGAGGATTATTATCATCGTGCTGTAATAGATGAGAATGGGAATTTCCAGCAATATGCTTATCACAAGAGGAATGGGACCGGTTGGAGGAGGGTTTGGAGAGCTGTGGAGGATCCCTGCAGAGTGAATGTTATCTGCGGTGTGTATGGCTTGTGCAGTTCTCCTGACAATGAATCAGTGAAGTGTGAGTGTATTCCAGGTTATATCCCTTTCGATGATCAAGATATTTCAAAAGGGTGTCACCCACCAATTGTCATCAATTACTGTGCAGAGAACAACTTCAAACTCCATGTTTTCGACGACACTGATTTCCATTTTAATACTCAACTTGTTAACTTGTCTGGTGTTGACTTGGAAAGTTGTAAGAAGGCCGTAATAGATGATTGTAACATTGTTGCTGCAACTTATGACCCTTCCACCTCCACGTGTGTCAAGAAGAGACTGCCCTTACTGAATGCTAGAAATAGCTCTTCTTCAAAGGGATTGAAAGCTCTGCTTAAAGCTGCTAACAGGGTTGAGTCAGAACTTCCTAAGAAGAAAAGTTTTAATGTAAGAGTCCTTTTGAAGGTTCTTGTTGCAGTTACTGCAACTCTTGCCTGTTTCTTTGGTGCACTTGCTGTCTACTATCATCCTTTCACTCGGAGACTAACAAGAAGAAAGAAGCATCTGAATGCAACAGCTATTGGAATCAACTTCAGAGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTTACTAAGATTCTTGGAAAGGGAGCTTCTGGAAAAGTCTATCGTGGTGCTTTAGTAATAGGTGATGCAGAGATTGATGTTGCAGTAAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAGAGTGAATTCACGACTGAGCTAAAAATTATTGGTCGTACTCATCATAGAAATTTGGTGAGGCTTTTGGGGTTTTGCATTGAGAGTAGCCATCGAATTCTTGTGTATGAGTTGATGCCAAATGGTGCCCTCTCTAGTTATTTGTTTGGAGAGGGAGAAAGGCCTGAATGGGGTCAGAGGATGGAAATGGCTCTTGGAGTAGCAAGAGGGTTGCTATACCTGCACGAAGAGTGCAACACCCAAATCATACATTGTGACATAAAGCCCGAAAATGTGTTACTTGATGCCAATTACACACCAAAGATTGCAGATTTTGGACTGTCGAAGCTTTTGAACAAAGATCAAACTAGAACAAACACTAATTTAAGAGGGACAATGGGATACATGGCACCTGAATGGCTAAAGAGTGCACCAATAACTGCTAAAGTTGACATATACAGTTATGGGGTTATGTTATTGGAGATTATTTGCTGCAGGAGGCACGTTGAGATTTGTGGGGATGGAAAAGACAGTGAAGATTATGATGTGGTTCTTACAAGTTGGGTTTTAAGGTGTGTGGTGTTGAAGCAACTAGAGTTAGTGGTGAGACATGACTCGGAAGTGCTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGATTGGACTGTGGTGTGTTCATCCAAATCCTGCTTTAAGACCTTCAATGAAGCACGTAATGCAAATGCTAGATGGAACAGTGGAAGTTGGTGTTCCTCCTTTGGTTTATGAGCAGATGATGGCAGATTGA 2331 0.4264 MSLPIFLPSIFILLSLLNGFHAIVQPNTSITAGSNSTWKSPSDDFEFGFLHLPSGLFLVGIWFGRISDITLAWYLSPPVEQNSQIQFTSAGNLVVVHPNGTTANTIYNSAEGDAATSADMQDDGNFVINGSNLVSVWQSFNSPTNTILPGQTLLSTKTLFSKGKGLSNYSLGSFMLQMQDDGNLLLRAYQWDDPAYWYISTTTPNVTLVFNSTTALMYLITGTGNIYSITNTTPTPVEDYYHRAVIDENGNFQQYAYHKRNGTGWRRVWRAVEDPCRVNVICGVYGLCSSPDNESVKCECIPGYIPFDDQDISKGCHPPIVINYCAENNFKLHVFDDTDFHFNTQLVNLSGVDLESCKKAVIDDCNIVAATYDPSTSTCVKKRLPLLNARNSSSSKGLKALLKAANRVESELPKKKSFNVRVLLKVLVAVTATLACFFGALAVYYHPFTRRLTRRKKHLNATAIGINFREFTFQELHEATDGFTKILGKGASGKVYRGALVIGDAEIDVAVKKLEKKIEKSESEFTTELKIIGRTHHRNLVRLLGFCIESSHRILVYELMPNGALSSYLFGEGERPEWGQRMEMALGVARGLLYLHEECNTQIIHCDIKPENVLLDANYTPKIADFGLSKLLNKDQTRTNTNLRGTMGYMAPEWLKSAPITAKVDIYSYGVMLLEIICCRRHVEICGDGKDSEDYDVVLTSWVLRCVVLKQLELVVRHDSEVLNDFKRFEEMALIGLWCVHPNPALRPSMKHVMQMLDGTVEVGVPPLVYEQMMAD 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02866 776 Gene3D Transferase(Phosphotransferase) domain 1 560 763 - -
Viun2g02866 776 ProSitePatterns Protein kinases ATP-binding region signature. 487 513 IPR017441 GO:0005524
Viun2g02866 776 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 201 IPR036426 -
Viun2g02866 776 Pfam S-locus glycoprotein domain 238 306 IPR000858 GO:0048544
Viun2g02866 776 Gene3D - 143 277 - -
Viun2g02866 776 CDD STKc_IRAK 487 759 - -
Viun2g02866 776 Gene3D Phosphorylase Kinase; domain 1 454 559 - -
Viun2g02866 776 SMART blect_4 29 143 IPR001480 -
Viun2g02866 776 SMART serkin_6 481 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02866 776 Pfam Protein kinase domain 485 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02866 776 ProSiteProfiles Protein kinase domain profile. 481 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02866 776 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 560 765 - -
Viun2g02866 776 Gene3D - 18 142 IPR036426 -
Viun2g02866 776 ProSiteProfiles Bulb-type lectin domain profile. 21 141 IPR001480 -
Viun2g02866 776 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 767 - -
Viun2g02866 776 Pfam D-mannose binding lectin 78 157 IPR001480 -
Viun2g02866 776 PIRSF SRK 1 774 IPR024171 GO:0004674
Viun2g02866 776 SUPERFAMILY Protein kinase-like (PK-like) 460 757 IPR011009 -
Viun2g02866 776 FunFam S-receptor-like serine/threonine-protein kinase 450 559 - -
Viun2g02866 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02866 Viun-Chr2 33120120 33122613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02866 409 762 Receptor kinase-like Gene Family AT5G45780 36.490 1.11e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun2g02866 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02866 - - gmx:102662509 1187.56