Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02808 ATGATTATGGGGGGTTTAGGAGATGAAATTGGAGTGATGAAAGGTCCCAATGAAGAAGATGATTCTGTTGGAAAGAACGAAGAACAAAAGTGGCCACCATGGCTTAGACCACTTCTGCAAACAAGTTTTTTTGTTCAATGCAAAGTCCATGCAGATTCCCACAAAAGTGAATGTAACATGTATTGTTTGGACTGTAACAATGGAGCCCTTTGTTCTGTCTGTCTTGCTTCTCACAGAGAACACAGAGCAATTCAGGTGGTTAGTTATACGTTCCATTCAATGCTGAATTATGCATCCAAAGTCAACTATGGATGGCCAGTTAAAATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATTCAGAAATTTGTGGACATAACAGAGGTTCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAACGAAAGGCCTCAGCCTAGGCCTGGCAAAGGAGTCACCAACACCTGCCAAGTCTGTGAGCGTAGCCTTCTTGATTCATTCACCTTCTGTTCTCTTGGTTGTAAGATAGTTGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGATGGGTCTGATGAGGAAGAATCAATAAATGGCATCAGCAATGAAAGTGCAAGAATAAAAATTCAAAGTTTCACACCATCAACACCACCACCAACAGTGGTGAATCACAGAACTGCTAAGAGGAGAAAGGGTGTCCCACATAGATCTCCAATGGGGGGTGCCCTTATTATAGGATACTACTAA 774 0.4147 MIMGGLGDEIGVMKGPNEEDDSVGKNEEQKWPPWLRPLLQTSFFVQCKVHADSHKSECNMYCLDCNNGALCSVCLASHREHRAIQVVSYTFHSMLNYASKVNYGWPVKIRRSSYHDVIRVSEIQKFVDITEVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFTFCSLGCKIVGTSKKFRKKKMLAETDGSDEEESINGISNESARIKIQSFTPSTPPPTVVNHRTAKRRKGVPHRSPMGGALIIGYY 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02808 257 CDD Bbox2 47 86 - -
Viun2g02808 257 MobiDBLite consensus disorder prediction 13 27 - -
Viun2g02808 257 MobiDBLite consensus disorder prediction 1 28 - -
Viun2g02808 257 Pfam PLATZ transcription factor 110 181 IPR006734 -
Viun2g02808 257 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 25 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02808 Viun-Chr2 32859801 32862117 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun2g02808 PLATZ 5.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02808 - - vun:114172978 519.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02809 11 40320270 40322496 Viun2g02808 2 32859801 32862117 ECH
Viun2g02808 2 32859801 32862117 Viun2g02808 2 32859801 32862117 ECH