Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02794 ATGTTAAGTGTGGCTCCTTCCGTTGATACCAACACTACCAAAGAGGTTCCTGCAACGAAAAATCAGCAGAACCAAATTTCTGAGATTACTCATGTATTCAAATCAAAGTTACCAGACATACCAATCTCCAACCACCTCCCCCTCCATGCCTACTGCTTCGAAAACCTCTCCAAATTCGCAGACCGTCCTTGCCTCATCGTCGGCTCCGCCGCCAAAACCTACACGTACGCAGAGACTCACCTTATATCGCGCAAGATTGCCGCCGGATTCTCGAACCTCGGAATCCGGAAGGGCGACGTCGTCATGATCCTCCTCCAGAACTCCGCCGAGTTCGTTTTATCCTTCCTCGCGGCCTCCATGATCGGGGCTGTTGCCACCACCGCCAACCCGTTCTACACCGCCGCCGAGATCTTCAAGCAGTTCACCGCCTCCAAGGCGAAGCTGATCATAACTCAGGCAATGTACGTGGACAAGCTCCGCAACCACGACGCCGGATGGACCCTCGGCGAGGACTTCAAGGTCGTGACCGTCGACGATCCGCCGGAGAATTGCCTCCACTTCTCGGTGCTCTCGGAGGCCGACGAGAGCGACGTTCCGGAGGTGGAGATCCACCCGGACGACGCGGTGGCGCTTCCGTTCTCCTCCGGCACCACGGGGTTGCCGAAAGGAGTGATTCTGACTCACAAGAGCTTAACCACGAGCGTGGCGCAACAGGTGGACGGCGAGAACCCTAACCTCTACCTCACTACCGACGACGTGCTCCTCTGCGTGCTCCCGCTGTTTCACATATTCTCGCTCAACAGTGTGCTGTTATGCGCGCTGAGGGCCGGGAGTGGCGTTTTGCTGATGCAGAAGTTCGAGATTGGGACGCTGCTGGAGCTCATACAGCGCTACCGCGTGTCGGTGGCGATGGTGGTGCCGCCGCTGGTGCTGGCGCTGGCCAAGAATCCGATGGTGGCGAATTTTGACCTCAGTTCAATACGGTTAGTTCTCTCCGGTGCCGCTCCCTTGGGTAAGGAACTCGAAGAGGCTCTCCACAGCAGGGTGCCTCACGCCGTTTTGGGACAGGGTTACGGGATGACAGAAGCAGGGCCAGTGCTTTCCATGTGCTTGGGCTTTGCAAAGCAACCATTCCCAACAAAATCGGGTTCTTGTGGAACTGTTGTCAGAAACGCAGAACTAAAGGTTGTTGACCCTGAAACGGATCGTTCTCTCGGGTACAATCAACCCGGTGAAATTTGCATCCGAGGGCTTCAGATCATGAAAGGATATCTGAACGATGATCAAGCGACAGCATTGACCATCGACGCAGAGGGTTGGCTTCACACCGGTGATGTTGGCTATGTAGATGATGACGATGAAATTTTCATCGTTGACAGGGTGAAAGAACTCATTAAATTTAAAGGCTTCCAGGTGCCCCCTGCAGAACTTGAAGGGCTTCTCGTTAGCCATCCCTCCATTGCAGACGCAGCAGTTGTCCCACAAAAGGATGTTGCTGCTGGTGAAGTTCCCGTTGCTTTCGTTGTCAGATCTAACGGCTTTGATCTAACAGAAGAGGCTGTGAAAGAGTTTATAGCCAAACAGGTGGTGTTTTACAAAAGACTGCACAAAGTTTATTTTGTTCATGCTATTCCCAAGTCCCCATCGGGAAAGATATTAAGGAAAGACTTGAGAGCAAAGCTAGAAGCTGCCGCCGCCGCCACTCCGACGGCATAA 1716 0.5367 MLSVAPSVDTNTTKEVPATKNQQNQISEITHVFKSKLPDIPISNHLPLHAYCFENLSKFADRPCLIVGSAAKTYTYAETHLISRKIAAGFSNLGIRKGDVVMILLQNSAEFVLSFLAASMIGAVATTANPFYTAAEIFKQFTASKAKLIITQAMYVDKLRNHDAGWTLGEDFKVVTVDDPPENCLHFSVLSEADESDVPEVEIHPDDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTDDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMQKFEIGTLLELIQRYRVSVAMVVPPLVLALAKNPMVANFDLSSIRLVLSGAAPLGKELEEALHSRVPHAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETDRSLGYNQPGEICIRGLQIMKGYLNDDQATALTIDAEGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEAAAAATPTA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02794 571 MobiDBLite consensus disorder prediction 1 21 - -
Viun2g02794 571 ProSitePatterns Putative AMP-binding domain signature. 211 222 IPR020845 -
Viun2g02794 571 Pfam AMP-binding enzyme 54 467 IPR000873 -
Viun2g02794 571 FunFam Long-chain-fatty-acid--CoA ligase FadD 34 462 - -
Viun2g02794 571 Gene3D - 22 461 IPR042099 -
Viun2g02794 571 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 30 559 - -
Viun2g02794 571 FunFam 4-coumarate--CoA ligase 2 463 564 - -
Viun2g02794 571 Pfam AMP-binding enzyme C-terminal domain 476 551 IPR025110 -
Viun2g02794 571 SUPERFAMILY Acetyl-CoA synthetase-like 44 563 - -
Viun2g02794 571 CDD 4CL 42 557 - -
Viun2g02794 571 Gene3D - 462 566 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02794 Viun-Chr2 32767116 32771232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02794 31 474 Monolignol Biosynthesis Gene Families AT1G65060 72.036 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02794 K01904 - gmx:547492 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02794 2 32767116 32771232 Viun2g02794 2 32767116 32771232 ECH