Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02786 ATGGATCCTTTTGATGATCTTCTACCCGAGGCTCCTGTTGCACGCATTCGGCCGGGTGCCAAGTTTGTTCCTAAGGCCAAAGCGAAACAGCGGCCACGAAAGGAAGTACCTTCGTCGGAACATGCAACCTCATCTAAAGATGAACTTACTGGGAATGAATGTGAAAATGCAATTGCTTCAACGCTAAGTGCGCCAGCGGAAGACTTTCCAAATTCTGAAAGTGGAAATCTTGAACAAATTAGTGTGGAGGGAGATAGTGCGGCCTTGGTGGGTGGTTCCACAATCACAGCATCTGAAATTGGTGCTGGTCAGAATTCTACAAACTTGTTAGAATCAGCATGTGAGGCTGATCCAACAGATTTTGACGGGGACTCAGTCACTAACTTCGTTTCTGAGACCAACGTCAGTAATGGCACGGATTTGGGCTTCAAAAGTGTTTCAGATAATAAAGTTTCAATAATTCAGACCGTTGATTCAAAGTCAAACTTTGAGAAAGAACCAGAGTTAGTATCTGCAGAGATTGGATTGGATCCTTTCAGCGACATCCTAGCTGATCTTCCCACAAGGAATGTTCATAAATTTAAACCCAAGATTAAGCCACGACCTAGAGTGGGCAATATGCCGGCTTCTGCTTCATCTGATGTTGTGATGGAAAAATCTGTTGAGTTGCCTACTTCTTGCACAGAAAACTTTCAATCTTTTCAGTCTAGTGGTGTACCAAACCAATCAACCAGTTTACCTTTGCCAACGTCAGAGATTCTTAGGACAAATTATTTGCCCGATAAGTTTGGTGACAGCAATAGCTTGGCAGCAGCAATTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTTAGGGGACGCAGTTCATAATGGTACTAGGGATTGGCCTTCTACCTTTGGTAAATCATCTGGAGAGGCTGCAGACATTTTTTCTGGGTTGGAATCCCTTGATGACTTTCTCACCCAAGCTACTACAGATACGGGAAAACCGGCTCTTCATTCTTTCAATGAGAAGGGTGCAGAGGAAAATTTCGTCACACCTGCTTGTAGTTCTATTAACTCCTTTGGGGAATGTGATACTACCCAAGTTCAAAGATGTCCTGAATATCATACACCAGAAGATCCAGTAACCTTCCATGAAGCTACTGTTCTCAATGAGAGTGATACTCACACTAACAATAGAATGTCGGAAACGGAGGAAATTGTGGACTTGAATCCCACCTATCCAAGAGATGATGTTTTTGATTATCAATCCATGAAATCTGGTGAAGATCCAACTTCTGGAATTCTGGTGCACGAAGACTTGACAATTGCTGCTGACAGTTCCACATTGGCTGATTTTTTGCACGCAAATGATTCAAGGGAAAAAGAAAATAAAAAGGATGGCTCAGACTCATGTTCTCTGAGGAAGAACAAAAGATCTTCTATTTCTGGTGAGGAGGATAATGGTGGTAAAACCTCAAGACAACGGAGAAAACTAGCAGCTTGCAAACCTAAAAACAGCTCATTGAATGAGGAGGTTGAAGATGATAATGACCTTGACCCTCCTTATCATTCTAACGAACATGAACTACAAGAAAATGATGATGACTATGAAGTCGATCATTCATCAAAGAAGAAGAGAGGATCAAAGAGATCACAGAAGAAATCTGTGGCCAAAAGTGGAAAAATGTCTCAAAGGCGTAAGAAGGCTGATGATGATGTACAAAAAAAAACTAAGGAACCTCCTAAAAAGTTCTCTCATTCAACCCGACGAAAGAAAAGATGTGTGGACAAGGCTCTGCTGGAAATTCCTGAGGACGAACTTGATCCTCGAACATTGCCTATGAAGGATATTATTTTACTTGCAGAATATAGGGAGCGGCAAGCGAAAAAAGACGCGATGACTTCGAATACGTCTCCCTCCAATCAAAGTGGTGGAGATTCTCTTCATGGGGCTGGTGCGTATAATGAACAGGAGTTCTCAGGTTCAGAAGATGATAGAGACCCATATGATGATCAAGACAATGAAAGGATTACATCAACTCCCGCTCTATGCAATTACCAGACTTTCATGGAAAAGACACCTAAGGGGAAATGGTCAAAACAAGATACCGAACTGTTTTATGAGGCTATTAGGGAGTTGGGTACAGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACCCGCCGTCAAATTAAGTTGAAATACAAGAAGGAAGAGCGGGAGCATTATTTACGGTTAAGAGATGCTATACATAACCGTGCAAAAGATCATTTTCATTATAACTTGTTGATTGAACGATTGCAACAAGCTTCCACCAAGGCAGAGGAGGAGGTTGTGGACCTGGCAACGGGAACTAATGAAGAGGCTGTGGATGCTGCCACAGTTAAGCATGATGCGGAGGTTAAAGAACAGGAAGATTCTGCGCCAGTTCAGAGTCCAGAGGAATATGATGACAGTGAGGATGACTCTCTAAAATGGTCTCAGTATAAAAGTCTCTATTAG 2493 0.4208 MDPFDDLLPEAPVARIRPGAKFVPKAKAKQRPRKEVPSSEHATSSKDELTGNECENAIASTLSAPAEDFPNSESGNLEQISVEGDSAALVGGSTITASEIGAGQNSTNLLESACEADPTDFDGDSVTNFVSETNVSNGTDLGFKSVSDNKVSIIQTVDSKSNFEKEPELVSAEIGLDPFSDILADLPTRNVHKFKPKIKPRPRVGNMPASASSDVVMEKSVELPTSCTENFQSFQSSGVPNQSTSLPLPTSEILRTNYLPDKFGDSNSLAAAIPSQLDSLNAMLLGDAVHNGTRDWPSTFGKSSGEAADIFSGLESLDDFLTQATTDTGKPALHSFNEKGAEENFVTPACSSINSFGECDTTQVQRCPEYHTPEDPVTFHEATVLNESDTHTNNRMSETEEIVDLNPTYPRDDVFDYQSMKSGEDPTSGILVHEDLTIAADSSTLADFLHANDSREKENKKDGSDSCSLRKNKRSSISGEEDNGGKTSRQRRKLAACKPKNSSLNEEVEDDNDLDPPYHSNEHELQENDDDYEVDHSSKKKRGSKRSQKKSVAKSGKMSQRRKKADDDVQKKTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPMKDIILLAEYRERQAKKDAMTSNTSPSNQSGGDSLHGAGAYNEQEFSGSEDDRDPYDDQDNERITSTPALCNYQTFMEKTPKGKWSKQDTELFYEAIRELGTDFSMIQQLFPDKTRRQIKLKYKKEEREHYLRLRDAIHNRAKDHFHYNLLIERLQQASTKAEEEVVDLATGTNEEAVDAATVKHDAEVKEQEDSAPVQSPEEYDDSEDDSLKWSQYKSLY 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02786 830 MobiDBLite consensus disorder prediction 541 558 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 628 644 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 29 48 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 795 830 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 559 577 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 590 608 - -
Viun2g02786 830 Gene3D - 694 756 - -
Viun2g02786 830 ProSiteProfiles SANT domain profile. 689 737 IPR017884 -
Viun2g02786 830 CDD SANT 693 734 IPR001005 -
Viun2g02786 830 MobiDBLite consensus disorder prediction 18 76 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 450 608 - -
Viun2g02786 830 SMART sant 690 738 IPR001005 -
Viun2g02786 830 MobiDBLite consensus disorder prediction 450 489 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 514 540 - -
Viun2g02786 830 Pfam Myb DNA-binding like 684 767 IPR039467 -
Viun2g02786 830 MobiDBLite consensus disorder prediction 625 678 - -
Viun2g02786 830 MobiDBLite consensus disorder prediction 49 76 - -
Viun2g02786 830 SUPERFAMILY Homeodomain-like 692 738 IPR009057 -
Viun2g02786 830 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 193 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02786 Viun-Chr2 32744050 32750073 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun2g02786 Myb_DNA-bind_7 6.9e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02786 K15198 - gmx:100792788 1041.57