Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02782 ATGGATCCTTTTGATGATCTTCTACCCGAGGCTCCTGTTGCACGCATTCGGCCGGGTGCCAAGTTTGTTCCTAAGGCCAAAGCGAAACAGCGGCCACGAAAGGAAGTACCTTCGTCGGAACATGCAACCTCATCTAAAGATGAACTTACTGGGAATGAATGTGAAAATGCAATTGCTTCAACGCTAAGTGCGCCAGCGGAAGACTTTCCAAATTCTGAAAGTGGAAATCTTGAACAAATTAGTGTGGAGGGAGATAGTGCGGCCTTGGTGGGTGGTTCCACAATCACAGCATCTGAAATTGGTGCTGGTCAGAATTCTACAAACTTGTTAGAATCAGCATGTGAGGCTGATCCAACAGATTTTGACGGGGACTCAGTCACTAACTTCGTTTCTGAGACCAACGTCAGTAATGGCACAACACAACCAGTTCACCCTGCTAATGTTGTAGAAAACAAATTGAATAATTTGGCTTCTCCATTTTCAACTTGCTCAACCATAGATAGGATGAAAGAACCCCCTAAAAATTGGGAAGGTTCATTTCTTGATATCAACAAATATGTGGAACTTATTGACAACTCATTGCAATCAGGCACGGATTTGGGCTTCAAAAGTGTTTCAGATAATAAAGTTTCAATAATTCAGACCGTTGATTCAAAGTCAAACTTTGAGAAAGAACCAGAGTTAGTATCTGCAGAGATTGGATTGGATCCTTTCAGCGACATCCTAGCTGATCTTCCCACAAGGAATGTTCATAAATTTAAACCCAAGATTAAGCCACGACCTAGAGTGGGCAATATGCCGGCTTCTGCTTCATCTGATGTTGTGATGGAAAAATCTGTTGAGTTGCCTACTTCTTGCACAGAAAACTTTCAATCTTTTCAGTCTAGTGGTGTACCAAACCAATCAACCAGTTTACCTTTGCCAACGTCAGAGATTCTTAGGACAAATTATTTGCCCGATAAGTTTGGTGACAGCAATAGCTTGGCAGCAGCAATTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTTAGGGGACGCAGTTCATAATGGTACTAGGGATTGGCCTTCTACCTTTGGTAAATCATCTGGAGAGGCTGCAGACATTTTTTCTGGGTTGGAATCCCTTGATGACTTTCTCACCCAAGCTACTACAGATACGGGAAAACCGGCTCTTCATTCTTTCAATGAGAAGGGTGCAGAGGAAAATTTCGTCACACCTGCTTGTAGTTCTATTAACTCCTTTGGGGAATGTGATACTACCCAAGTTCAAAGATGTCCTGAATATCATACACCAGAAGATCCAGTAACCTTCCATGAAGCTACTGTTCTCAATGAGAGTGATACTCACACTAACAATAGAATGTCGGAAACGGAGGAAATTGTGGACTTGAATCCCACCTATCCAAGAGATGATGTTTTTGATTATCAATCCATGAAATCTGGTGAAGATCCAACTTCTGGAATTCTGGTGCACGAAGACTTGACAATTGCTGCTGACAGTTCCACATTGGCTGATTTTTTGCACGCAAATGATTCAAGGGAAAAAGAAAATAAAAAGGATGGCTCAGACTCATGTTCTCTGAGGAAGAACAAAAGATCTTCTATTTCTGGTGAGGAGGATAATGGTGGTAAAACCTCAAGACAACGGAGAAAACTAGCAGCTTGCAAACCTAAAAACAGCTCATTGAATGAGGAGGTTGAAGATGATAATGACCTTGACCCTCCTTATCATTCTAACGAACATGAACTACAAGAAAATGATGATGACTATGAAGTCGATCATTCATCAAAGAAGAAGAGAGGATCAAAGAGATCACAGAAGAAATCTGTGGCCAAAAGTGGAAAAATGTCTCAAAGGCGTAAGAAGGCTGATGATGATGTACAAAAAAAAACTAAGGAACCTCCTAAAAAGTTCTCTCATTCAACCCGACGAAAGAAAAGATGTGTGGACAAGGCTCTGCTGGAAATTCCTGAGGACGAACTTGATCCTCGAACATTGCCTATGAAGGATATTATTTTACTTGCAGAATATAGGGAGCGGCAAGCGAAAAAAGACGCGATGACTTCGAATACGTCTCCCTCCAATCAAAGTGGTGGAGATTCTCTTCATGGGGCTGGTGCGTATAATGAACAGGAGTTCTCAGGTTCAGAAGATGATAGAGACCCATATGATGATCAAGACAATGAAAGGATTACATCAACTCCCGCTCTATGCAATTACCAGACTTTCATGGAAAAGACACCTAAGGGGAAATGGTCAAAACAAGATACCGAACTGTTTTATGAGGCTATTAGGGAGTTGGGTACAGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACCCGCCGTCAAATTAAGTTGAAATACAAGAAGGAAGAGCGGGAGCATTATTTACGGTTAAGAGATGCTATACATAACCGTGCAAAAGATCATTTTCATTATAACTTGTTGATTGAACGATTGCAACAAGCTTCCACCAAGGCAGAGGAGGAGGTTGTGGACCTGGCAACGGGAACTAATGAAGAGGCTGTGGATGCTGCCACAGTTAAGCATGATGCGGAGGTTAAAGAACAGGAAGATTCTGCGCCAGTTCAGAGTCCAGAGGAATATGATGACAGTGAGGATGACTCTCTAAAATGGTCTCAGTATAAAAGTCTCTATTAG 2670 0.4169 MDPFDDLLPEAPVARIRPGAKFVPKAKAKQRPRKEVPSSEHATSSKDELTGNECENAIASTLSAPAEDFPNSESGNLEQISVEGDSAALVGGSTITASEIGAGQNSTNLLESACEADPTDFDGDSVTNFVSETNVSNGTTQPVHPANVVENKLNNLASPFSTCSTIDRMKEPPKNWEGSFLDINKYVELIDNSLQSGTDLGFKSVSDNKVSIIQTVDSKSNFEKEPELVSAEIGLDPFSDILADLPTRNVHKFKPKIKPRPRVGNMPASASSDVVMEKSVELPTSCTENFQSFQSSGVPNQSTSLPLPTSEILRTNYLPDKFGDSNSLAAAIPSQLDSLNAMLLGDAVHNGTRDWPSTFGKSSGEAADIFSGLESLDDFLTQATTDTGKPALHSFNEKGAEENFVTPACSSINSFGECDTTQVQRCPEYHTPEDPVTFHEATVLNESDTHTNNRMSETEEIVDLNPTYPRDDVFDYQSMKSGEDPTSGILVHEDLTIAADSSTLADFLHANDSREKENKKDGSDSCSLRKNKRSSISGEEDNGGKTSRQRRKLAACKPKNSSLNEEVEDDNDLDPPYHSNEHELQENDDDYEVDHSSKKKRGSKRSQKKSVAKSGKMSQRRKKADDDVQKKTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPMKDIILLAEYRERQAKKDAMTSNTSPSNQSGGDSLHGAGAYNEQEFSGSEDDRDPYDDQDNERITSTPALCNYQTFMEKTPKGKWSKQDTELFYEAIRELGTDFSMIQQLFPDKTRRQIKLKYKKEEREHYLRLRDAIHNRAKDHFHYNLLIERLQQASTKAEEEVVDLATGTNEEAVDAATVKHDAEVKEQEDSAPVQSPEEYDDSEDDSLKWSQYKSLY 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02782 889 MobiDBLite consensus disorder prediction 29 48 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 509 548 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 649 666 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 509 666 - -
Viun2g02782 889 ProSiteProfiles SANT domain profile. 748 796 IPR017884 -
Viun2g02782 889 MobiDBLite consensus disorder prediction 618 636 - -
Viun2g02782 889 Pfam Myb DNA-binding like 743 826 IPR039467 -
Viun2g02782 889 MobiDBLite consensus disorder prediction 18 76 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 600 617 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 854 889 - -
Viun2g02782 889 CDD SANT 752 793 IPR001005 -
Viun2g02782 889 Gene3D - 753 815 - -
Viun2g02782 889 SMART sant 749 797 IPR001005 -
Viun2g02782 889 MobiDBLite consensus disorder prediction 687 703 - -
Viun2g02782 889 SUPERFAMILY Homeodomain-like 751 797 IPR009057 -
Viun2g02782 889 MobiDBLite consensus disorder prediction 573 599 - -
Viun2g02782 889 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 252 889 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 49 76 - -
Viun2g02782 889 MobiDBLite consensus disorder prediction 684 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02782 Viun-Chr2 32744050 32752101 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun2g02782 Myb_DNA-bind_7 7.8e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02782 K15198 - gmx:100792788 1143.64