Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02726 ATGGGGTTTTGGGGGATTGAAGTTAAACCTGGCAAACCGTGTCCTTATCACTCTGACAATGTGCGAGGGAAGCTGCACGTTACTCAGGCTACTCTAGGCATTGGCTCATCAAAGGATAAAAGCATTCTTCAGTGCGCTTCTGGACATAAAAGTCCAGTTTTCTTGTGTTCACTGATACCAAATAGAATTGAGTCATGCCCTTTGAATCTTAAGTTTGACATTGATGACTTAGTTGCGTTCTCAGTGATTGGTTCACGAAGCATCCACCTTTCTGGTTTTTTCGCGGCTGATGATGGAGATGAGCTTAAGGATGACTATGAATATGATTCATGGGGAGAAGATATTGAAGGAACTGACACAGATGAATCATCTGAATATGATAGTGAAGATGACTATGATGATGGCTTTATTGTTGATAGTGATGTTGACATGTACCAGTCTTCACCAGTCCCAAATAGTGGAGTTATAATTGAAGAAATATTGGATGATGAAAAACCTACAAATGGAGATGATCAAAATAAGCAATTAAAGAAAAAGAAACAGGTAGCTAAGTTGAAACCAACAGACAGCAAAAATTTCGAGTCTGCAATTGTTGCTAAGGGTGAGACTGATCTTGTGGAGAGTGATGATGAAGATGAAGATGGTTTTCCAATTTCCACTGCTGGGAAAGATGTCTCTGTATCTCAGAAGGCAGATGCAGAAATGAAAGAACACGCACTTAAGAAAATTGAGAATGCCAACAAGAAGGGAAAAGATGTCGATCATTCTGCTGGAGTTAAACGGAAGGTTGATAGTACTGATGAAGATGTGCCACAGGATGGGAAAAAGAAGAAGAAAAGAAATAAGTTAAAGGAACATATTAAAGGGGAAAATGCTGATGCATCTGGCAATAGCAATGAGACAAATGTTACTGCCCCAGATGAAAAGCATCCTGAGGCTGTCAAAACTACAACAAGCCAGAGTGATGTTTCTCATGCAAAGGATGAAAATGAGGGAAAGTTGGTCAATAATGAGGTCAGTGCTGAGAAAAAAAACAAGAAAAAGAAGAAGAAAAAGACCAAAGAGCCGGAAGGGGCAGCTGCTGTAGATCAAATTACTTCAAGTGCCGAAAAGCAGAATTTGCTTATCACCTCAGAAAAAAAGGGGAAGAAACAAACTGAGACGAAGGCATCTCAAGTGAGAACTTTTCCGAACGGATTGGTTATAGAGGAGGTCCTTATGGGTAAACCTGATGGCAAAAGAGCTGCTCCTGGAAAAAAGGTCAGTGTTAAATATATTGGCAAGCTGCAAAAGGGTGGGAAAATATTTGACTCAAATGTGGGAAGAGCACCCTTTAAATTTCGCCTGGGTGTAGGACAAGTCATCAAAGGGTGGGAGGTTGGGATCAATGGGATGAGGATCGGGGACAAAAGAAGAATCACAATTCCACCATCTATGGGATATGCAGACAAGCGCGTTGGGACTATACCACCAAATTCGTGGCTTGTATTTGATGTTGAGTTGGTTGATGTTGATCGCTAA 1521 0.4083 MGFWGIEVKPGKPCPYHSDNVRGKLHVTQATLGIGSSKDKSILQCASGHKSPVFLCSLIPNRIESCPLNLKFDIDDLVAFSVIGSRSIHLSGFFAADDGDELKDDYEYDSWGEDIEGTDTDESSEYDSEDDYDDGFIVDSDVDMYQSSPVPNSGVIIEEILDDEKPTNGDDQNKQLKKKKQVAKLKPTDSKNFESAIVAKGETDLVESDDEDEDGFPISTAGKDVSVSQKADAEMKEHALKKIENANKKGKDVDHSAGVKRKVDSTDEDVPQDGKKKKKRNKLKEHIKGENADASGNSNETNVTAPDEKHPEAVKTTTSQSDVSHAKDENEGKLVNNEVSAEKKNKKKKKKKTKEPEGAAAVDQITSSAEKQNLLITSEKKGKKQTETKASQVRTFPNGLVIEEVLMGKPDGKRAAPGKKVSVKYIGKLQKGGKIFDSNVGRAPFKFRLGVGQVIKGWEVGINGMRIGDKRRITIPPSMGYADKRVGTIPPNSWLVFDVELVDVDR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02726 506 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 413 502 IPR001179 GO:0003755
Viun2g02726 506 MobiDBLite consensus disorder prediction 199 366 - -
Viun2g02726 506 FunFam Peptidyl-prolyl cis-trans isomerase 393 506 - -
Viun2g02726 506 MobiDBLite consensus disorder prediction 163 183 - -
Viun2g02726 506 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 418 505 IPR001179 GO:0003755
Viun2g02726 506 Gene3D Nucleoplasmin core domain 1 100 - -
Viun2g02726 506 SUPERFAMILY FKBP-like 388 504 - -
Viun2g02726 506 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 505 - -
Viun2g02726 506 MobiDBLite consensus disorder prediction 229 276 - -
Viun2g02726 506 Pfam Nucleoplasmin-like domain 3 94 IPR041232 -
Viun2g02726 506 MobiDBLite consensus disorder prediction 110 130 - -
Viun2g02726 506 Gene3D - 359 506 IPR046357 GO:0003755
Viun2g02726 506 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02726 Viun-Chr2 32508218 32512471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02726 418 502 Calmodulin-binding Proteins AT5G48570 50.575 1.91e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02726 K14826 - gmx:100792856 775.393