Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02687 ATGGAATCCGTGTTCCAAGAAGAAGGTTCATCTTCTGTAACTTCTTCGCCCCTTCAGTTCTTTTCCATGATGTCTCTTTCACCTGGCATAGGATCCCCCTATCCCTGGCTTAGAGAACTGAAATCTGAGGAAAGGGGTTTGTGTTTGATCCATTTGTTGATCAGTTGTGCCAATCATGTGGCTAATGGTAGTCTCGAGAACGCAAACATGTTGCTTGACCAGATTTCCCAGCTTGCTTCCCCTGATGGGGATACTATTCAGCGTGTTGCTGCATATTTCACCCAAGCACTCGCTGATCGGATACTGAAATCATGGCCTGGCCTCCACAGGGCACTCAATTCCACCAGAATAGCCATGGTGTCTGATGAAATTCTTGTTCATAAGCTCTTTTTCGACCTTTTCCCGTTCCTGAAGATGTCCTATATTCTGACAAATCAGGCCATTGTTGAGGCCATGCTGGGGGAGAAAATGGTGCATGTGATTGATCTCAATGCTAATGGACCAGACCAGTGGATTGCGCTCCTCCGTGTTCTGAGTGCACGCCCTGGAGGCCCTCCTCATTTGAGAATCACCGGTGTGCATCACCAGAAAGAGATTCTGGATCAGATGGCTCATAAACTCACTCAAGAAGCAGAAAAATTGGATATTCCATTCCAGTTCAACCCTGTTGTCAGCAAGATAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTGGCAATTAGTTGCATTCTGCAGTTGCATTCCCTCTTGGCCTTGGATGATGATGCCTCGAGGAGAAGATCTCCTCTTTTTTGGTCGAACAATTCAAATGCAAATGCAAATGCAATTCAACTGCAGAGAATCCTGCAGATGAACCAAAACACACATTTGGTTGAAAAGGATATGGTTCACGGCTATAGCCCAAGTCCAGATTCAGCCTCAGCCTCGGCCTCGGCCTCATCCTCGCCCGGTTCTTCATCTGCATCGATGAAATCTGAGAGCTTTCTGAATGCCTTGTGGGGGTTATCACCAAAGATCATGGTTGTGACGGAGCAAGACTTCAACCACAACAGTTCAAACCTGATGGAGAGGCTGCTAGAATCTCTGAATTCATATGCTGCATTGTTTGATTGTTTGGAATGCACTGTGTCCAGGGCATCCTTGGACAGAATGAAGATCGAGAAGATGCTTCTGGGTGAGGAAATCAAGAACATCGTAGCTTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAAAAGATGGATAAGTGGATCCAGAGGCTTGATTCATCTGGTTTTGCAAGCGTGCCTTTAAGCCGTCAAGGTTTGACTCTGGCAATGAGGTTCATGGAGAACTATGGTTGTAATGGGTACAGAATGAGAGAGGAAAATGGCTGTGTGATCATTTACTGGCAGGACCGTACCTTGTTTTCTGTGACAGCATGGAGATCAAGAAGGTGA 1452 0.4614 MESVFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWLRELKSEERGLCLIHLLISCANHVANGSLENANMLLDQISQLASPDGDTIQRVAAYFTQALADRILKSWPGLHRALNSTRIAMVSDEILVHKLFFDLFPFLKMSYILTNQAIVEAMLGEKMVHVIDLNANGPDQWIALLRVLSARPGGPPHLRITGVHHQKEILDQMAHKLTQEAEKLDIPFQFNPVVSKIENLDFDKLRVKTGEALAISCILQLHSLLALDDDASRRRSPLFWSNNSNANANAIQLQRILQMNQNTHLVEKDMVHGYSPSPDSASASASASSSPGSSSASMKSESFLNALWGLSPKIMVVTEQDFNHNSSNLMERLLESLNSYAALFDCLECTVSRASLDRMKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDSSGFASVPLSRQGLTLAMRFMENYGCNGYRMREENGCVIIYWQDRTLFSVTAWRSRR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02687 483 MobiDBLite consensus disorder prediction 300 327 - -
Viun2g02687 483 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 476 IPR005202 -
Viun2g02687 483 MobiDBLite consensus disorder prediction 307 327 - -
Viun2g02687 483 ProSiteProfiles GRAS family profile. 40 480 IPR005202 -
Viun2g02687 483 Pfam GRAS domain family 49 480 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02687 Viun-Chr2 32378114 32380840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02687 1 483 GRAS Transcription Factor Family AT1G50420 61.336 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun2g02687 GRAS 5.5e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02687 - - vun:114174232 898.271