Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02667 ATGCACTGTTTCAAAGACAAATTCACAACAGAATTAATCAGTAGTGAAATGGATTCGACAGATAGCAGTATGAACAAAAAATCTAAAGAAATTGAACGATGTTACGATGACTATCCCAAGAAGAGAAAGCGTCCATGCCAAGTAGCGGTGGTTATTCCCACCATGGAAGAATCCAAGGCCGCCGCCGCCTCCTCCTCCCCCGCAACACACGGTTCCATATCAGTGATCGGGAGGCGGCGCGCAATGGAGGACGCCGTCGTGGTGGTTCCCGGTTTGGTGGCGGCGGGGCAGTGGTGTGGCGGTTACGATTTCTTCGCGGTTTACGACGGACACGGCGGGACGTTGGTGGCGAACGCCTGCCGCGACAGGCTGCACCTGCTGTTGGCGGATGAGGTGAAGGAGAACGCGAAGAAGGGATTGGATTGGTACGAGGTGATGTGTTCGTGTTTCATGAAGATGGACAAGGAGATCGGAGTTGGAGGTGAGGCGCACGATGACGGTGGCGGAAACACCACAGGCTCAACGGCGGCGGTGGTTGTTGTTGGGAAGAAGGAGATCGTGGTGGCGAATTGCGGTGACTCGAGGGCGGTGCTGTGCCGTGGCGGTGTAGCTGTACCACTTTCGCGTGATCATAAGCCTGATCGTCCAGATGAACGAGAGAGAATAGAAGCTGCTGGTGGAAGAGTGATTAATTGGAACGGAAGTCGTGTCTTGGGAGTTCTTGCTACTTCCAGATCCATAGGGGATCATTCGATGAAACCTTTTGTGATATCTGAACCAGAGACGATGGTGTACGAGAGAACAGAGTGTGATGAGTTTGTGGTGGTGGCAAGTGATGGGTTATGGGATGTGGTTTCTAACAAGTTTGTTTGTGAGGTGGTACGAAGCTGCCTCCATGGGCAAATCAAGAGGAATTTGAAAGAGGAGAGTGTTGTTGTAAGCAATGCAACAGAAGCTGCTTCGTTGTTGGCAGAGTTGGCCATGGCTCGTGGAAGCAAAGACAACATCAGTGTCATAGTCATCCAACTCAACAACATCACTTCATCCTGA 1050 0.5152 MHCFKDKFTTELISSEMDSTDSSMNKKSKEIERCYDDYPKKRKRPCQVAVVIPTMEESKAAAASSSPATHGSISVIGRRRAMEDAVVVVPGLVAAGQWCGGYDFFAVYDGHGGTLVANACRDRLHLLLADEVKENAKKGLDWYEVMCSCFMKMDKEIGVGGEAHDDGGGNTTGSTAAVVVVGKKEIVVANCGDSRAVLCRGGVAVPLSRDHKPDRPDERERIEAAGGRVINWNGSRVLGVLATSRSIGDHSMKPFVISEPETMVYERTECDEFVVVASDGLWDVVSNKFVCEVVRSCLHGQIKRNLKEESVVVSNATEAASLLAELAMARGSKDNISVIVIQLNNITSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02667 349 Gene3D - 64 347 IPR036457 -
Viun2g02667 349 Pfam Protein phosphatase 2C 72 336 IPR001932 -
Viun2g02667 349 CDD PP2Cc 70 343 IPR001932 -
Viun2g02667 349 FunFam Protein phosphatase 2C 51 62 349 - -
Viun2g02667 349 ProSiteProfiles PPM-type phosphatase domain profile. 69 343 IPR001932 -
Viun2g02667 349 PANTHER PROTEIN PHOSPHATASE 47 342 IPR015655 GO:0004722|GO:0006470
Viun2g02667 349 SMART PP2C_4 59 341 IPR001932 -
Viun2g02667 349 SUPERFAMILY PP2C-like 68 345 IPR036457 -
Viun2g02667 349 ProSitePatterns PPM-type phosphatase domain signature. 104 112 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02667 Viun-Chr2 32249707 32251313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02667 14 343 PP2C-type Phosphatase Gene Family AT2G29380 44.092 6.50e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02667 K14497 - gmx:100813248 451.055