Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02666 ATGGACGGAATGCAAGAAAGAAACTCACAGCTTGGAACTGATATTGGTTCCTCCTTATCAAAGCTGATACTAACAAGTGGCTCAAACACCCTTGATTCAATCTTCTCAGATTGTACCCAAACAAACGCTACCAGCAGCAACAACTCCGTGTTGGACTATTTAGAACCCTTCGGGTCTTCGGGGTTTGAGCCTTTGGGCTCTTCCGTTTACCTTCGCCAGAGGGACATCCTCCAAAAGTTCTACCAAGAAAGCCGAGGGAACGGGAACGGCAACGGCAACGGGTCTCTTCTTCCCACTTCCTTGTCAAACCCGTCTATAAACTCTGTTTACACTGCTTCGTTGACTTCTTCTTTGACCAACCCTTGCAAGAAAAAGCTCTACAGAGGAGTGAGACAGAGACACTGGGGCAAATGGGTCGCCGAAATTAGACTTCCCCAGAACAGGATGAGAGTGTGGCTGGGCACGTACGACACCGCCGAAGCAGCCGCATATGCCTACGACCGCGCCGCGTATAAACTACGTGGAGAGTACGCGCGTTTGAATTTCCCCAATTTGAAAGACCCAACCAAGTTAGGGTTCGGAGATTCCGCCAGATTGAACGCCTTGAAGAGCTCCGTCGACGCCAAAATCCAGGCCATATGCCAGAAGGTGAAAAGGGAGAGAGCCAAAAAGATCGCCGCCAAGAAGCTCAGTTCTGCCGCCGCTCACGCCAACCGCAAGGAGAGCGAGAAGATCAACTCCTCTGCTTCCTCCTCGTCATCGTCGCTGCCGCTGTCGCCGCCGTCGATTTTTTGCGATAATTGGGCGAACGAGTTGTTTTCGCCGACCGTTTCGGAGGACGGGATTTGGAAGGGGGAGAACTCGCCGACCTCGGTTTCGATGGAGTATCCAATGATGGTAACGGACGAGACAGAGTTCGAAGGTTGTTCTCTGGCAAGGTTACCTTCGTTCGATCCCGAGTTGATTTGGGAAGTTCTGGCCGTTTGA 987 0.5177 MDGMQERNSQLGTDIGSSLSKLILTSGSNTLDSIFSDCTQTNATSSNNSVLDYLEPFGSSGFEPLGSSVYLRQRDILQKFYQESRGNGNGNGNGSLLPTSLSNPSINSVYTASLTSSLTNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARLNALKSSVDAKIQAICQKVKRERAKKIAAKKLSSAAAHANRKESEKINSSASSSSSSLPLSPPSIFCDNWANELFSPTVSEDGIWKGENSPTSVSMEYPMMVTDETEFEGCSLARLPSFDPELIWEVLAV 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02666 328 Gene3D AP2/ERF domain 126 184 IPR036955 GO:0003700|GO:0006355
Viun2g02666 328 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 28 326 - -
Viun2g02666 328 MobiDBLite consensus disorder prediction 244 258 - -
Viun2g02666 328 ProSiteProfiles AP2/ERF domain profile. 126 183 IPR001471 GO:0003700|GO:0006355
Viun2g02666 328 CDD AP2 125 185 IPR001471 GO:0003700|GO:0006355
Viun2g02666 328 PRINTS Ethylene responsive element binding protein signature 127 138 IPR001471 GO:0003700|GO:0006355
Viun2g02666 328 PRINTS Ethylene responsive element binding protein signature 149 165 IPR001471 GO:0003700|GO:0006355
Viun2g02666 328 FunFam Ethylene-responsive transcription factor 2 125 184 - -
Viun2g02666 328 SUPERFAMILY DNA-binding domain 126 183 IPR016177 GO:0003677
Viun2g02666 328 SMART rav1_2 126 189 IPR001471 GO:0003700|GO:0006355
Viun2g02666 328 MobiDBLite consensus disorder prediction 236 258 - -
Viun2g02666 328 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02666 Viun-Chr2 32235578 32237401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02666 2 327 AP2-EREBP Transcription Factor Family AT1G64380 45.232 4.42e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Viun2g02666 AP2 6.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02666 - - gmx:100785364 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02666 2 32235578 32237401 Viun2g02666 2 32235578 32237401 ECH