Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02664 ATGTCCACCACCGGAACTACAACCTCAGAAGTGAGCAGCAACGAGTGGGAAGTGATACACATGAGCGAGCAAGAGGAGGATCTGATTCACAGGATGTACAAGCTGGTCGGAGACAAGTGGAATTTGATAGCGGGTCGCATTCCGGGTCGTAAAGCAGAAGAGATAGAGAGATTCTGGATTATGAGACACACTCACACTTTCTCTGTTACAAAAAATCAAAGTAAAGCCAAAGACTCTTAA 240 0.4542 MSTTGTTTSEVSSNEWEVIHMSEQEEDLIHRMYKLVGDKWNLIAGRIPGRKAEEIERFWIMRHTHTFSVTKNQSKAKDS 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02664 79 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 20 65 - -
Viun2g02664 79 SUPERFAMILY Homeodomain-like 22 60 IPR009057 -
Viun2g02664 79 CDD SANT 21 59 IPR001005 -
Viun2g02664 79 Gene3D - 22 79 - -
Viun2g02664 79 FunFam MYB-like transcription factor 20 62 - -
Viun2g02664 79 Pfam Myb-like DNA-binding domain 22 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02664 Viun-Chr2 32224836 32226386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02664 21 59 MYB Transcription Factor Family AT5G52600 58.974 1.19e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Viun2g02664 Myb_DNA-binding 4.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02664 K09422 - gmx:100527129 135.576