Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02663 ATGCAAAGTGAAAAAGGTTGGGAGCAGAAAGCACTGGTGAGTGAGTTAATTCAGGGGTTGGAGATCGCAAGAAAGTTGAAGGAAGACTTCAATATACCCTCTTCGATCGACACAAGGGACTCACTACTGCAGAGGATACTGTGTTCTTACAACAAGGCTTTGCTTCTTCTACGACGGAATCCACCAATTTCAAACTCAGAAACCATGCATCAACCAACTCAAACTTCGTCACCACAGTCCCTACAACTTCGTCACCAAAGTCCTCCGAAGGAACACTTTGAAGGTGCCCTCAAGAATCATCATCAAGAACTTAAACAAACTGCAAAGAAAAGAAAGAAGTTGCCGAAAAGGACGGAACAGGTTAGAGTGAAGATCGAGAATGGGGTTGAAGAACCTCTCCAAGATGGTTACAGCTGGAGAAAATATGGACAGAAAAACATCCTCAATGCAAAATATCCCAGAAGCTACTACAGATGCACATTCCAAAAATCTAAGGATTGCTGCGCCACGAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTGTTTGACATAAGTTACCGAGGAAGCCACGTCTGTTCTCACGTTCCGTCATTAAAATCACCAGACACAGAAGAGAAACCGCAAGGTTGTGATAATAACGTTCAGTTTCATGGTGCAGAGTCATGGCGAGAAAGAGTTACAAACTGCACAAACACATCGACTGTGGAAACGGATAACGTGACGCCAAATCCATTCCCTTCGTTTGGATGCATGATACAAGATAACCACCACATGTTTCTTTCTTCCTTTGTACTAGAGAATGATCCCTTTTTCAGCACCATTTCCCAAACATCCTTGTTCTCTCCGAACACACCTGAATTAAATTCTCTTGTGTCTCCGTCTTTCCATGTACATGATGAATTCGACGGGGTCTTTGAGAATCTTTGCCCTGATTCTAATGCTGCCGGGATCGTTTTAGCTGATACATCAACCACCAATTTTTCAACTTTTGACTTTAGTTTCGATGCAGTGGGAATTGGTGCAAGTTGTCCTTCAATGCCTCGGGGTTTTCATCCTAAGTGCACTTGA 1071 0.4332 MQSEKGWEQKALVSELIQGLEIARKLKEDFNIPSSIDTRDSLLQRILCSYNKALLLLRRNPPISNSETMHQPTQTSSPQSLQLRHQSPPKEHFEGALKNHHQELKQTAKKRKKLPKRTEQVRVKIENGVEEPLQDGYSWRKYGQKNILNAKYPRSYYRCTFQKSKDCCATKQVQRSEEDPNVFDISYRGSHVCSHVPSLKSPDTEEKPQGCDNNVQFHGAESWRERVTNCTNTSTVETDNVTPNPFPSFGCMIQDNHHMFLSSFVLENDPFFSTISQTSLFSPNTPELNSLVSPSFHVHDEFDGVFENLCPDSNAAGIVLADTSTTNFSTFDFSFDAVGIGASCPSMPRGFHPKCT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02663 356 Gene3D WRKY domain 118 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g02663 356 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g02663 356 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g02663 356 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g02663 356 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g02663 356 MobiDBLite consensus disorder prediction 63 86 - -
Viun2g02663 356 MobiDBLite consensus disorder prediction 63 92 - -
Viun2g02663 356 FunFam WRKY transcription factor 53 119 196 - -
Viun2g02663 356 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 259 IPR044810 GO:0003700
Viun2g02663 356 MobiDBLite consensus disorder prediction 104 118 - -
Viun2g02663 356 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02663 Viun-Chr2 32221503 32223221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02663 7 275 WRKY Transcription Factor Family AT4G23810 34.304 4.16e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun2g02663 WRKY 1.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02663 - - vun:114174666 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02663 2 32221503 32223221 Viun2g02663 2 32221503 32223221 ECH
Viun2g02663 2 32221503 32223221 Viun10g02126 10 36145180 36147494 ECH
Viun2g02663 2 32221503 32223221 Viun3g00482 3 2857639 2859442 PCT