Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g02663 | ATGCAAAGTGAAAAAGGTTGGGAGCAGAAAGCACTGGTGAGTGAGTTAATTCAGGGGTTGGAGATCGCAAGAAAGTTGAAGGAAGACTTCAATATACCCTCTTCGATCGACACAAGGGACTCACTACTGCAGAGGATACTGTGTTCTTACAACAAGGCTTTGCTTCTTCTACGACGGAATCCACCAATTTCAAACTCAGAAACCATGCATCAACCAACTCAAACTTCGTCACCACAGTCCCTACAACTTCGTCACCAAAGTCCTCCGAAGGAACACTTTGAAGGTGCCCTCAAGAATCATCATCAAGAACTTAAACAAACTGCAAAGAAAAGAAAGAAGTTGCCGAAAAGGACGGAACAGGTTAGAGTGAAGATCGAGAATGGGGTTGAAGAACCTCTCCAAGATGGTTACAGCTGGAGAAAATATGGACAGAAAAACATCCTCAATGCAAAATATCCCAGAAGCTACTACAGATGCACATTCCAAAAATCTAAGGATTGCTGCGCCACGAAGCAAGTGCAGAGATCAGAAGAAGACCCCAATGTGTTTGACATAAGTTACCGAGGAAGCCACGTCTGTTCTCACGTTCCGTCATTAAAATCACCAGACACAGAAGAGAAACCGCAAGGTTGTGATAATAACGTTCAGTTTCATGGTGCAGAGTCATGGCGAGAAAGAGTTACAAACTGCACAAACACATCGACTGTGGAAACGGATAACGTGACGCCAAATCCATTCCCTTCGTTTGGATGCATGATACAAGATAACCACCACATGTTTCTTTCTTCCTTTGTACTAGAGAATGATCCCTTTTTCAGCACCATTTCCCAAACATCCTTGTTCTCTCCGAACACACCTGAATTAAATTCTCTTGTGTCTCCGTCTTTCCATGTACATGATGAATTCGACGGGGTCTTTGAGAATCTTTGCCCTGATTCTAATGCTGCCGGGATCGTTTTAGCTGATACATCAACCACCAATTTTTCAACTTTTGACTTTAGTTTCGATGCAGTGGGAATTGGTGCAAGTTGTCCTTCAATGCCTCGGGGTTTTCATCCTAAGTGCACTTGA | 1071 | 0.4332 | MQSEKGWEQKALVSELIQGLEIARKLKEDFNIPSSIDTRDSLLQRILCSYNKALLLLRRNPPISNSETMHQPTQTSSPQSLQLRHQSPPKEHFEGALKNHHQELKQTAKKRKKLPKRTEQVRVKIENGVEEPLQDGYSWRKYGQKNILNAKYPRSYYRCTFQKSKDCCATKQVQRSEEDPNVFDISYRGSHVCSHVPSLKSPDTEEKPQGCDNNVQFHGAESWRERVTNCTNTSTVETDNVTPNPFPSFGCMIQDNHHMFLSSFVLENDPFFSTISQTSLFSPNTPELNSLVSPSFHVHDEFDGVFENLCPDSNAAGIVLADTSTTNFSTFDFSFDAVGIGASCPSMPRGFHPKCT | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g02663 | 356 | Gene3D | WRKY domain | 118 | 197 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g02663 | 356 | SMART | WRKY_cls | 133 | 195 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g02663 | 356 | Pfam | WRKY DNA -binding domain | 134 | 193 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g02663 | 356 | ProSiteProfiles | WRKY domain profile. | 128 | 191 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g02663 | 356 | SUPERFAMILY | WRKY DNA-binding domain | 132 | 195 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun2g02663 | 356 | MobiDBLite | consensus disorder prediction | 63 | 86 | - | - | |
Viun2g02663 | 356 | MobiDBLite | consensus disorder prediction | 63 | 92 | - | - | |
Viun2g02663 | 356 | FunFam | WRKY transcription factor 53 | 119 | 196 | - | - | |
Viun2g02663 | 356 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 5 | 259 | IPR044810 | GO:0003700 | |
Viun2g02663 | 356 | MobiDBLite | consensus disorder prediction | 104 | 118 | - | - | |
Viun2g02663 | 356 | MobiDBLite | consensus disorder prediction | 100 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g02663 | Viun-Chr2 | 32221503 | 32223221 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g02663 | 7 | 275 | WRKY Transcription Factor Family | AT4G23810 | 34.304 | 4.16e-42 | 147 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Viun2g02663 | WRKY | 1.7e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g02663 | - | - | vun:114174666 | 717.998 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun2g02663 | 2 | 32221503 | 32223221 | Viun2g02663 | 2 | 32221503 | 32223221 | ECH | |
Viun2g02663 | 2 | 32221503 | 32223221 | Viun10g02126 | 10 | 36145180 | 36147494 | ECH | |
Viun2g02663 | 2 | 32221503 | 32223221 | Viun3g00482 | 3 | 2857639 | 2859442 | PCT |