Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02650 ATGCAAAGCATTTTCTGTTTGGTGTCTCTGCTTTCTCTGTTTTCCCTCTGTCTCTCCCGACCCAATGCAGAACTCACAGAGGACAAGCAAGCACTGCTTCATTTGGTGGAAAAGTTGGCTCCTTCACGACCCCTCAATTGGAACGCAACCTCTTCTCCTTGTACCTCTTGGACCGGTGTAACCTGCAACTCCGACCACTCACGAGTTATAGCCATTCATTTACCAGGCTTCGGCTTTCACGGAACCATTCCTCCCAATACGTTAAGCCGTGTCACGTTCTTGCAGACACTCAGTCTCAGATCTAACTCCATAACTGGTCCTCTTCCCTCTGATTTCTCCAACCTCTCCAACCTTTCCTTTCTCTACCTTCAGTTCAACAATTTCTCTGGTCCCTTACCTGACTTTTCTACCTGGAGGAACCTCTCTGTTCTCGACCTCTCCAATAACTGTTTCACCGGCACCGTTCCTCTCTCCCTCTCCCGTTTGACTCACCTAACTTCCATCAACCTCGCCAACAACTCGCTTTCTGGCCAAATCCCTCTCTCTCTCCACAGGTTTCCCGACTCTGCTTTCGTAGGAAACAACAATGTCTCTCTCCAGACAGTTTCACATTCCAAATCTGCGAAACACCGTGAAACGGCGCTGTTTTGGGTTGTTGTTGCCGCTGCTTCTGTTGCTCTTGCAATGTTCCTTGTTTTTATCTTCGTGTGCTGGTCCAGAAAGAAGAAAGGGGATTCCTTTGCTCGGAAGTTGCTGAAGGGAGATATGTCTCCGGAAAAAGTAGTGTCCAGGGACCTTGATGCGAATAATAAAATCTTTTTCTTTGAGGGGTGTAGCTATGCGTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTGGGGAAGGGGACGTTTGGTGCTGCATATAAGGCTGCGTTGGAGGATGCTACCACTGTCGTTGTGAAGAGGTTGAAGGAAGTGGCTGCTGGAAAGAAAGACTTTGAGCAACACATGGAGATTGTGGGGAATCTGAAACACGAGAATGTGGTTCAGTTAAAGGGGTATTACTATTCCAAAGATGAGAAACTCATGGTCTATGATTACTACACTCAAGGGAGTCTCTCTACTTTGTTGCATGGCAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGAGAGCAGAATGAAAATTGCTTTGGGTGCTGCACGAGGCCTAACTCGGATCCACTGCGAGAATGGGGGGAAGCTTGTGCATGGCAACATCAGATCCTCAAATATCTTTGTGAACACTAAACAATATGGTTGCATATCTGATCTTGGCCTAGCAACCATCATGAGTTCAGTTGCCATACCCATCTCACGCGCCGCTGGTTACAGGGCACCAGAAATCACAGACACTAGAAAAGCAACGCAACCTGGTGATGTTTACAGTTTCGGTGTGGTGTTGCTGGAGATTCTGACTGGGAAATCCCCTGTGTACACCACTGGTGGCGACGAGATTGTGCACTTGGTGAGATGGGTTCATTCGGTTGTGAGAGAGGAGTGGACCGCGGAAGTGTTTGACTTGGAGCTTATCAGATATCCCAACATAGAGGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCTTGCGTGGGGAGGGTTCCGGAACAGAGGCCTAGGATGTCGGAAGTTGTAAAAATGATAGAAAATGTGAGGCAGATTGATGTAGCGGTGAATCAGCAACCATCCTCTGAGAACCAAGCCAAATGTGCAACACAAACCCCTTTAACCACTTAG 1764 0.4768 MQSIFCLVSLLSLFSLCLSRPNAELTEDKQALLHLVEKLAPSRPLNWNATSSPCTSWTGVTCNSDHSRVIAIHLPGFGFHGTIPPNTLSRVTFLQTLSLRSNSITGPLPSDFSNLSNLSFLYLQFNNFSGPLPDFSTWRNLSVLDLSNNCFTGTVPLSLSRLTHLTSINLANNSLSGQIPLSLHRFPDSAFVGNNNVSLQTVSHSKSAKHRETALFWVVVAAASVALAMFLVFIFVCWSRKKKGDSFARKLLKGDMSPEKVVSRDLDANNKIFFFEGCSYAFDLEDLLRASAEVLGKGTFGAAYKAALEDATTVVVKRLKEVAAGKKDFEQHMEIVGNLKHENVVQLKGYYYSKDEKLMVYDYYTQGSLSTLLHGKRGEDRVPLDWESRMKIALGAARGLTRIHCENGGKLVHGNIRSSNIFVNTKQYGCISDLGLATIMSSVAIPISRAAGYRAPEITDTRKATQPGDVYSFGVVLLEILTGKSPVYTTGGDEIVHLVRWVHSVVREEWTAEVFDLELIRYPNIEEEMVEMLQIAMSCVGRVPEQRPRMSEVVKMIENVRQIDVAVNQQPSSENQAKCATQTPLTT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02650 587 PANTHER OS05G0588300 PROTEIN 6 573 - -
Viun2g02650 587 SUPERFAMILY Protein kinase-like (PK-like) 293 557 IPR011009 -
Viun2g02650 587 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 364 571 - -
Viun2g02650 587 FunFam pollen receptor-like kinase 1 258 363 - -
Viun2g02650 587 Gene3D Transferase(Phosphotransferase) domain 1 365 583 - -
Viun2g02650 587 Pfam Leucine Rich Repeat 94 115 IPR001611 GO:0005515
Viun2g02650 587 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Viun2g02650 587 ProSiteProfiles Protein kinase domain profile. 289 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02650 587 ProSitePatterns Protein kinases ATP-binding region signature. 295 326 IPR017441 GO:0005524
Viun2g02650 587 Pfam Protein tyrosine and serine/threonine kinase 293 556 IPR001245 GO:0004672|GO:0006468
Viun2g02650 587 Gene3D Ribonuclease Inhibitor 25 206 IPR032675 -
Viun2g02650 587 FunFam Probable inactive receptor kinase RLK902 25 184 - -
Viun2g02650 587 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Viun2g02650 587 Gene3D Phosphorylase Kinase; domain 1 258 363 - -
Viun2g02650 587 SUPERFAMILY L domain-like 40 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02650 Viun-Chr2 32148278 32150927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02650 22 584 Receptor kinase-like Gene Family AT4G23740 59.609 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun2g02650 PK_Tyr_Ser-Thr 2.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02650 - - vun:114171626 1131.7