Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02631 ATGGAACATAGAAACATTCTGTTATCGGCGCTGAGTGTTGGGGTGGGTGTAGGAGTGGGGATTGGGTTGTCCTCTGGACAACACCTTTCCAAATGGGGAGTTAATGGTAATTCTTCCTCAGACCGCGTTACTCCGGAGAATCTCGAACAGGAAATGCTCCGAATGGTCGTGGATGGCAGAGAAAGCAGTGTCACATTTGATCAATTCCCTTTTTATCTTAGGGAACAGACAAGGGTGATGTTAACAAGTGCTGCTTATGTCCATTTGAAGAATGCCGAGGTTTCCAGATATACACGGAATCTTGCTCCTGCAAGCCGGACTATCATGCTTTCGGGGCCAGCAGAGCTTTATCAACAAGTGCTTGCCAAAGCTTTGGCCCACTACTTTGAGGCGAAGTTGCTTCTGTTAGATCTCACTGACTTTTCATTGAAGATTCAGAATAAATATGGTTATGCCAACAAACGATCGACTTTCAAAAGGTCTACCTCAGAGACAACTTTGGAGCGGATATCCGACCTATTTGAATCATTTTCAATGTTTTCACAAAAGGAAGAACTTAAAGGGAAAATTCACAGGCAACCCAGCGGAGGGGACCTTCGGTCAATGGAATCTGAAGGATTCTGTAATCCTTCTAAGATGCGTAGGAATGCGTCTGCCTCTGCAAATATCAGTAACCTAGCTTTGCAAAGCAATCCTACAAATTCAGCTTCAGCCCCTCAGAAGAACATAACCAACTGGCCTTTTGATGAAAAGCTTCTTGTACAAACTCTTTACAAGGTTCTAATGTATGTATCAAAAACATATCCCATTGTTCTATATTTGCGGGATGTTGATAAGTTGTTGTATAGATCACAACGGACATATAACCTATTCCAGAAAATGTTGAATAAACTACATGGACGAATTTTGATTCTTGGTTCACGAGTTTTGGATTCTGGAAGTGACTCCAAAGAAGTGGATGAAAGACTTTCTTCCGTCTTCCCATACAACATAGAAATCAGTCCTCCAGAAGATGAATCTTATCATGTCAGCTGGAAGTCTCAATTTGAAGAGAACATGAAGACAATACAGACTCAGGATAATAAGAACCATATTATGGAAGTGCTTGCAGCCAATGATCTTTATTGTGATGACCTGGGTTCCATCTGTGTGGCAGATACAATAGCTTTCAGTAACCATATAGAAGAGATCGTCGTCTCAGCAATTTCTTATCATTTAATGAGTAACATAGATCCTGAATACAGAAATGGCAAACTAGTTATTCCTTGTAGCAGTTTGTCCCATGCATTGGGTATATTCCAGGAGGGGAAATTCAGTACAAGAGATACATTAAAATTAGAAGCCCAGGCAGTTACGACTGAGCCGAGAGAAGAAGCTGCTGTGAAGCCAGAAACAGCGTCAGAAAAACCTGCTCCTGAAATAAAGGCTGAAGCAGATACATCAATTTCAGTGGGAAAAACTGACGGTGAAAATGCATTTCCTGCATCAAAAGTTGAAGTTCCCCCCGACAATGAGTTTGAGAAGCGAATAAGGCCTGAGGTAATACCAGCAAGCGAAATTGGTGTAAAATTCTCTGATGTTGGTGCCTTAGATGAGACCAAAGAATCGCTTCAAGAACTAGTTATGCTTCCTCTTCGAAGGCCAGACCTTTTCCGCGGAGGCCTTCTAAAGCCTTGTAAAGGAATATTGCTTTTTGGACCTCCTGGCACAGGGAAGACAATGCTGGCAAAGGCCATTGCAAACGAAGCTGGAGCAAGTTTCATTAATGTATCCATGTCTACCGTCACCTCTAAATGGTTTGGTGAAGACGAGAAGAATGTTAGAGCTTTGTTCACTCTAGCAGCCAAGGTCTCCCCAACTATTATATTTGTTGATGAGGTTGATAGTATGCTGGGGCAACGTACCAGAGTTGGAGAGCATGAAGCCATGCGTAAAATAAAGAATGAGTTTATGACACTTTGGGATGGACTAATGACAAATCCATCGGAGCGTATCCTTGTTCTTGCTGCGACCAATAGGCCGTTTGACCTGGATGAAGCAATAATTAGGAGATTTGAAAGGAGAATAATGGTGGGGATGCCAAGCGCGGAGAACAGGGAAAAAATTTTGACGACTCTTTTGCGAAAAGAAAAGGTGGACAAGAAATTTGATTTTAAGGAACTCGCAACTATGACAGAAGGATACAGCGGAAGTGATCTCAAGAACTTGTGTACAACTGCTGCTTACAGACCTGTTAGAGAGTTAATTCAGCAAGAGAGAATAAAAATGCTGGAGAAAAGGCAGAAAGGTGTTGAAGAACAGAATAACAATGCGGGAAATACCCAAGATGGTGTGGAAGCAAAAGAGGAAGTTAAACAGGAAAGAGTAATTTCCCTTAGACCTTTGAACATGCAAGACTTCAAAGAGGCTAGGAGTCAGGTTTCCGCAAGCTACGCAGCTGAGGGGGCAGGAATGAGTGAGTTAAAGCAGTGGAATGAAATGTACGGGGAAGGAGGTTCAAGGAAGAAAGAGCAATTATCTTACTTCCTGTGA 2532 0.423 MEHRNILLSALSVGVGVGVGIGLSSGQHLSKWGVNGNSSSDRVTPENLEQEMLRMVVDGRESSVTFDQFPFYLREQTRVMLTSAAYVHLKNAEVSRYTRNLAPASRTIMLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQNKYGYANKRSTFKRSTSETTLERISDLFESFSMFSQKEELKGKIHRQPSGGDLRSMESEGFCNPSKMRRNASASANISNLALQSNPTNSASAPQKNITNWPFDEKLLVQTLYKVLMYVSKTYPIVLYLRDVDKLLYRSQRTYNLFQKMLNKLHGRILILGSRVLDSGSDSKEVDERLSSVFPYNIEISPPEDESYHVSWKSQFEENMKTIQTQDNKNHIMEVLAANDLYCDDLGSICVADTIAFSNHIEEIVVSAISYHLMSNIDPEYRNGKLVIPCSSLSHALGIFQEGKFSTRDTLKLEAQAVTTEPREEAAVKPETASEKPAPEIKAEADTSISVGKTDGENAFPASKVEVPPDNEFEKRIRPEVIPASEIGVKFSDVGALDETKESLQELVMLPLRRPDLFRGGLLKPCKGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTVTSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTLWDGLMTNPSERILVLAATNRPFDLDEAIIRRFERRIMVGMPSAENREKILTTLLRKEKVDKKFDFKELATMTEGYSGSDLKNLCTTAAYRPVRELIQQERIKMLEKRQKGVEEQNNNAGNTQDGVEAKEEVKQERVISLRPLNMQDFKEARSQVSASYAAEGAGMSELKQWNEMYGEGGSRKKEQLSYFL 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02631 843 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 47 842 - -
Viun2g02631 843 MobiDBLite consensus disorder prediction 761 782 - -
Viun2g02631 843 Gene3D - 521 784 IPR027417 -
Viun2g02631 843 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 521 696 - -
Viun2g02631 843 Pfam ATPase family associated with various cellular activities (AAA) 562 692 IPR003959 GO:0005524|GO:0016887
Viun2g02631 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 352 IPR027417 -
Viun2g02631 843 SMART AAA_5 558 695 IPR003593 GO:0016887
Viun2g02631 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 803 IPR027417 -
Viun2g02631 843 MobiDBLite consensus disorder prediction 451 476 - -
Viun2g02631 843 Pfam AAA+ lid domain 716 756 IPR041569 -
Viun2g02631 843 Gene3D - 694 782 - -
Viun2g02631 843 MobiDBLite consensus disorder prediction 457 475 - -
Viun2g02631 843 Coils Coil 754 774 - -
Viun2g02631 843 ProSitePatterns AAA-protein family signature. 665 684 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02631 Viun-Chr2 32064664 32070323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02631 474 756 Calmodulin-binding Proteins AT3G56690 36.770 4.54e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02631 - - gmx:100783137 1336.24