Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02571 ATGGGTAAGAAGTTAGGGGGTTGGGAGTGCAGGAGCAGTTTGCAGTGCTGTGGAAATTTGTGGCCTCAGGCACGCTATCCTTCGATGACGGCGGTGGAAGCGGGAAAGACGGTGGTGGAAGGATCAGAAACCACCGTGGTTTTGTTCAGCGTTATTGGAATGACGTGTGCTGCGTGCGCCGGATCCGTCGAGAAAACCATCAAACGCTTACCTGGAATCCGAGAGGCCGTTGTTGATGTCTTGAATCACAAAGCTCAGGTTCTTTACTTTCCGTCAATGGTTAACGAGGAGAGGATACGCGAGGCCATTGAAGATGCTGGATTTGAAGCCAAAGTTATTGAAGAAGACTCCAACTACACCTCAACTCAAATATGCCGCATACACATTCGAGGCATGACGTGTACCTCTTGCTCCTCCACTATTGAATCAGCTCTACATTCCCTTCGTGGGGTGCATAAGGCACGAGTGGCCTTAACAACAGAAGAAGCAGAAGTCCAGTATGACCCCAAAATCCTCACCCACAACCACTTAATGGAAGCTATACAAGACACCGGGTTCGAAGCCATACTAATAAGCACAGGGGAACACATGAGCAAGATTGAACTTAAAATCGATGGCATTAAAAACGACCAATCCCTTGCTGCCATTCAGCGCTCTCTCCATGCACTCCCTGGTGTTCAAACCATAGACATATATCCGGACATTAACAAAATTGCCATAACTTATATACCACACATGACAGGACCAAGAACCTTCATAGAAGTCATAGAATCCACTGGATCAGGGTGTTTTAAAGCGGTGATATTTCCAAACGATGAAGGAAGAGAAGCACTTAGACAGCAGGAAATTAACCGATACTTCATGCTTTTCATATGGAGTTTAGCTTTTACCATTCCTGTTTTCTTTACATCCATGGTTCTCATGTATATACCTGGAGTTAAACGTGTTTTGGATATCAAAATTGTCAATATGTTGACTATTGGACTTCTCTTGAGGTGTAACTTTGCTACCCCGGTGCAGTTTATCATAGGGAGACGGTTCTATGTTGGGGCATATAAAGCATTGCGCAAAGGTTCTGCTAACATGGATGTGTTGATAGCATTAGGGACAAATGCAGCATATTTTTATTCTCTCTATGTTGTGGAAAGAGCTGTTTTCTCTCGGCATTTCAAAGGAAACGATTTCTTTGAGACCAGCTCTATGCTTATTTCTTTTATTCTGTTGGGGAAGTATTTGGAAGTGTTGGCAAAGGGGAAGACATCTCAGGCCATTGCAAAGCTTATGAACTTGACACCTGAGACAGCGACCTTGTTAACTCAAGATGACAATGGGGATGTTGTTAGTGAAAAACAAATTGATAGTCGGTTGATACAAAAGGACGATGTGATCAAGGTTGTCCCTGGTTCAAAAGTAGCATCTGATGGCTTTGTCATATGGGGACAAAGTCATGTAAATGAGAGCATGATAACCGGAGAGGCAAGGCCCGTGGCAAAGAGGACGGGTGATATGGTGATTGGAGGCACTATGAATGAGAATGGGGTCATGCATGTTAAGGTGACAAGAGTTGGATCCGAGAGTGCTCTCTCCCAGATCGTTCGACTTGTTGAGTCAGCCCAGATGGCTAAAGCTCCGGTTCAAAAACTTGCAGATCATATTTCTAAATACTTTGTTCCTCTGGTCATTGTGCTTTCTCTTTCAACATGGCTCTCCTGGTTTATAGCAGGAAAGTTACATGCATACCCGAAATCTTGGATACCATCCTCCATGAACTACTTTGAGCTTGCACTTCAGTTTGGGATTTCAGTCATGGTCATTGCCTGTCCTTGTGCTCTAGGCCTAGCCACTCCTACTGCTGTTATGGTTGGTACTGGAGTTGGTGCAACACAAGGTGTGTTGATCAAAGGGGGCCAAGCATTAGAAAGTGCAAACAAGGTGAATTGCATTGTGTTTGACAAGACAGGAACACTCACAGTTGGGAAGCCAGTGGTTGTAACAACAAAAATCTTCAAAAAGATGTCAATTAAAGATTTCTATGAATTTACTGCTGCAGCAGAGGTGAACAGCGAACATCCAATAGCTAAGGCCATTGTTGAGCACGCCAAGAAGATCACAGAAGAACAAAATCATTCCTGGCCAGAAGCACGCAACTTTGTTTCTGTTTCAGGCCATGGAGTAAAGGCCATTGTTCTAAACAAGGAAATATTGGTAGGGAATAAAAAGATGATGCTGGATCATAACATAACAATTTCAGCTGATGCTGAAGAAATACTAGCAGAAGCTGAAAGCCTGGCTCAAACTGGGATTTTAGTATCCTTGGATGGAGAAGTCGCTGGAGTTTTGGCTGTATCTGATCCATTGAAACCTGGCGCCAATGAAGTTATTTCCATTCTTAATTCCATGAAAATTAAGAGCATCATGGTGACAGGTGATAACTGGGGTACTGCCAATTCCATAGCCAGACAAGCCGGTATTGAAACTGTCATAGCAGAGGCTCAACCTGAGACTAAAGCAACTAAAATAAAAGAACTGCAGTTGAGACAGGGTTGTGGGTATACGGTGGCAATGGTGGGAGATGGCATCAACGACTCACCAGCACTTGTGGCAGCTGATGTTGGGATGGCAATAGGCGCTGGCACAGACATAGCAATTGAAGCAGCAGACATCGTTCTGATGAAGAGCAACTTGGAGGATATAATCATTGCCATTGACCTTGCGAACAGAACCTTCTCTCGTATACGTCTAAACTACTTTTGGGCTTTGGGTTACAATATCTTAGCCATCCCAATTGCAGCGGGAATTCTTTACTCATCCACTAGATTTCGCTTACCACCATGGATTGCTGGAGCTGCAATGGCGGCCTCTTCTCTCAGTGTTGTTTGCTCATCCCTCTTGTTAAAGAATTACAAGAGACCTTCCAAGCTAAACAAGATGGAGATGAATGGTGTAAACATTCAATAA 2958 0.4398 MGKKLGGWECRSSLQCCGNLWPQARYPSMTAVEAGKTVVEGSETTVVLFSVIGMTCAACAGSVEKTIKRLPGIREAVVDVLNHKAQVLYFPSMVNEERIREAIEDAGFEAKVIEEDSNYTSTQICRIHIRGMTCTSCSSTIESALHSLRGVHKARVALTTEEAEVQYDPKILTHNHLMEAIQDTGFEAILISTGEHMSKIELKIDGIKNDQSLAAIQRSLHALPGVQTIDIYPDINKIAITYIPHMTGPRTFIEVIESTGSGCFKAVIFPNDEGREALRQQEINRYFMLFIWSLAFTIPVFFTSMVLMYIPGVKRVLDIKIVNMLTIGLLLRCNFATPVQFIIGRRFYVGAYKALRKGSANMDVLIALGTNAAYFYSLYVVERAVFSRHFKGNDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMNLTPETATLLTQDDNGDVVSEKQIDSRLIQKDDVIKVVPGSKVASDGFVIWGQSHVNESMITGEARPVAKRTGDMVIGGTMNENGVMHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADHISKYFVPLVIVLSLSTWLSWFIAGKLHAYPKSWIPSSMNYFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESANKVNCIVFDKTGTLTVGKPVVVTTKIFKKMSIKDFYEFTAAAEVNSEHPIAKAIVEHAKKITEEQNHSWPEARNFVSVSGHGVKAIVLNKEILVGNKKMMLDHNITISADAEEILAEAESLAQTGILVSLDGEVAGVLAVSDPLKPGANEVISILNSMKIKSIMVTGDNWGTANSIARQAGIETVIAEAQPETKATKIKELQLRQGCGYTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLANRTFSRIRLNYFWALGYNILAIPIAAGILYSSTRFRLPPWIAGAAMAASSLSVVCSSLLLKNYKRPSKLNKMEMNGVNIQ 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02571 985 CDD HMA 49 111 IPR006121 GO:0046872
Viun2g02571 985 ProSitePatterns E1-E2 ATPases phosphorylation site. 651 657 IPR018303 -
Viun2g02571 985 PRINTS P-type cation-transporting ATPase superfamily signature 649 663 - -
Viun2g02571 985 PRINTS P-type cation-transporting ATPase superfamily signature 778 789 - -
Viun2g02571 985 PRINTS P-type cation-transporting ATPase superfamily signature 800 810 - -
Viun2g02571 985 PRINTS P-type cation-transporting ATPase superfamily signature 879 891 - -
Viun2g02571 985 PRINTS P-type cation-transporting ATPase superfamily signature 485 499 - -
Viun2g02571 985 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Viun2g02571 985 NCBIfam heavy metal translocating P-type ATPase 362 965 IPR027256 GO:0006812|GO:0016020|GO:0019829
Viun2g02571 985 PRINTS Copper-transporting ATPase 1 signature 46 71 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase 1 signature 147 168 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase 1 signature 101 121 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase 1 signature 72 95 - -
Viun2g02571 985 NCBIfam HAD-IC family P-type ATPase 402 938 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun2g02571 985 Gene3D - 122 194 - -
Viun2g02571 985 Gene3D - 45 117 - -
Viun2g02571 985 NCBIfam copper ion binding protein 127 188 IPR006122 GO:0005507
Viun2g02571 985 NCBIfam copper ion binding protein 49 110 IPR006122 GO:0005507
Viun2g02571 985 SUPERFAMILY Calcium ATPase, transmembrane domain M 400 642 IPR023298 -
Viun2g02571 985 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 19 983 - -
Viun2g02571 985 SUPERFAMILY Calcium ATPase, transduction domain A 449 535 IPR008250 -
Viun2g02571 985 ProSiteProfiles Heavy-metal-associated domain profile. 198 264 IPR006121 GO:0046872
Viun2g02571 985 CDD P-type_ATPase_Cu-like 290 952 - -
Viun2g02571 985 ProSitePatterns Heavy-metal-associated domain. 51 80 IPR017969 GO:0046872
Viun2g02571 985 Gene3D - 198 260 - -
Viun2g02571 985 CDD HMA 129 188 IPR006121 GO:0046872
Viun2g02571 985 ProSiteProfiles Heavy-metal-associated domain profile. 45 111 IPR006121 GO:0046872
Viun2g02571 985 SUPERFAMILY HMA, heavy metal-associated domain 193 263 IPR036163 GO:0046872
Viun2g02571 985 PRINTS Copper-transporting ATPase signature 399 418 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase signature 347 366 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase signature 419 437 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase signature 929 943 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase signature 830 847 - -
Viun2g02571 985 PRINTS Copper-transporting ATPase signature 558 572 - -
Viun2g02571 985 Gene3D - 656 732 IPR023299 GO:0000166
Viun2g02571 985 Gene3D - 733 784 IPR023299 GO:0000166
Viun2g02571 985 Pfam E1-E2 ATPase 430 627 - -
Viun2g02571 985 Pfam Heavy-metal-associated domain 127 187 IPR006121 GO:0046872
Viun2g02571 985 Pfam Heavy-metal-associated domain 49 109 IPR006121 GO:0046872
Viun2g02571 985 Gene3D - 616 913 IPR023214 -
Viun2g02571 985 Pfam haloacid dehalogenase-like hydrolase 645 870 - -
Viun2g02571 985 SUPERFAMILY HMA, heavy metal-associated domain 41 116 IPR036163 GO:0046872
Viun2g02571 985 FunFam ATPase copper transporting beta 120 193 - -
Viun2g02571 985 ProSiteProfiles Heavy-metal-associated domain profile. 123 189 IPR006121 GO:0046872
Viun2g02571 985 FunFam Probable copper-transporting ATPase HMA5 763 913 - -
Viun2g02571 985 SFLD C1.7: P-type atpase like 631 907 - -
Viun2g02571 985 SUPERFAMILY HMA, heavy metal-associated domain 121 195 IPR036163 GO:0046872
Viun2g02571 985 FunFam Copper-transporting ATPase HMA5 44 115 - -
Viun2g02571 985 Gene3D - 417 539 - -
Viun2g02571 985 ProSitePatterns Heavy-metal-associated domain. 129 158 IPR017969 GO:0046872
Viun2g02571 985 FunFam Copper-transporting ATPase 1, putative 417 539 - -
Viun2g02571 985 SFLD p-type atpase 631 907 IPR044492 -
Viun2g02571 985 SUPERFAMILY HAD-like 648 962 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02571 Viun-Chr2 31760968 31767856 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02571 48 985 Primary Pumps ATPases AT1G63440 71.262 0.0 1398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02571 K17686 - gmx:100817431 1649.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02571 2 31760968 31767856 Viun2g02571 2 31760968 31767856 ECH
Viun2g02571 2 31760968 31767856 Viun3g00596 3 3665592 3675401 PCT