Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g02567 | ATGAAGCCTCGTACTTCATTATGGCTTCTCTCTTTGATTTACACGCTCTCTTTTGTGGCTTCTGACACTGTGCCCTCTAATGAAGTTTGGGCGCTTAGGAGCTTCAAAGAAGCTGTTTATGAAGACCTATATCAAGTTTTGTCCGATTGGGATACGGTAGAAGCAGATCCTTGTAACTGGTTTGGGGTCACTTGCACTATGGTGCGAGATCATGTCATCAAGCTAAACATATCAGGTTCATCATTAAAGGGGTTTCTTGCACCAGAGTTGGGGCAACTCACCTACTTGCAAGAACTAATTTTGCACGGAAACAATCTCATTGGAACAATACCTAGAGAGTTGGGCGAGTTGAAATATCTCAGGGTGTTTGATCTAGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGTTTGGAAATCTAACTCAAGTTGTGAAAATAAACTTGCAGTCCAACGGGTTGACTGGTAGGCTACCTCCAGAGCTTGGAAACTTGAGATTCCTTCAAGAACTTCGGTTGGATAGGAATAGACTTCAAGGACCTATTCCCGCTGGTGGTAGCTCAAATTTTGCTTCATACATGCATGGGATGTATGTTTCCAAGGAGAATGTAACTGGCTTCTGTCGTTCGTCTCAGTTGAAAGTAGCAGACTTCTCATATAATTTTTTAGTTGGTAGCATACCCAAATGCTTGGAGTATCTTCCGAGGTTAAGCTTTCAAGGGAATTGCATCCAGAGCCAGGATATAAAGCAGCGACCTCGTATACAGTGTGCGGGTGCTTCTCCTGCCAGTGCCAAGAGCCAGCCAGTGGTGAATCCAAGTCACCAACCTACTGAATATGTGTCCAAGCATCACGGAGCGTCAAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGGACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATCATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCATACGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGACAGTGTGGTTTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAGGGAGGAGCATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCGGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTTGGTTACTGTAGAGAAGACGCTCCATTTATAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGACCACCTTCATTGTTATGAAGAAGGATGTCAATTTTCCTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGTGGACTCAAGTATTTGCATACCGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGCGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAACTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATATTTGCTTTTGGGGTACTTCTACTGGAGTTAATCAGCGGAAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTTGACTGGGCCAAGGACTACCTCGAAAGGCCAGATGAAATGTCAAACGTGGTGGATCCTGAACTGAAGCATTTTAGACATGAAGACCTGAAAGTGATATGCGAGGTAATAACTCTCTGTATCAACCCTGATAAAACTAGGCAGCCATCTATGAGAGAATTATGCAGCATGCTGGAGAACAGAATTGATACATCAGTAAGCGTGGAGCTTAAGTCGTCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCTTAA | 1992 | 0.4332 | MKPRTSLWLLSLIYTLSFVASDTVPSNEVWALRSFKEAVYEDLYQVLSDWDTVEADPCNWFGVTCTMVRDHVIKLNISGSSLKGFLAPELGQLTYLQELILHGNNLIGTIPRELGELKYLRVFDLGMNQLTGPIPPEFGNLTQVVKINLQSNGLTGRLPPELGNLRFLQELRLDRNRLQGPIPAGGSSNFASYMHGMYVSKENVTGFCRSSQLKVADFSYNFLVGSIPKCLEYLPRLSFQGNCIQSQDIKQRPRIQCAGASPASAKSQPVVNPSHQPTEYVSKHHGASKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIREEHWTGYLELYFQREVADLARLNHENIGKLLGYCREDAPFIRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLELISGRPPYCKDKGYLVDWAKDYLERPDEMSNVVDPELKHFRHEDLKVICEVITLCINPDKTRQPSMRELCSMLENRIDTSVSVELKSSSLAWAELALLS | 663 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g02567 | 663 | Gene3D | Ribonuclease Inhibitor | 27 | 139 | IPR032675 | - | |
Viun2g02567 | 663 | SUPERFAMILY | Protein kinase-like (PK-like) | 342 | 638 | IPR011009 | - | |
Viun2g02567 | 663 | Gene3D | Transferase(Phosphotransferase) domain 1 | 446 | 653 | - | - | |
Viun2g02567 | 663 | Gene3D | Ribonuclease Inhibitor | 140 | 260 | IPR032675 | - | |
Viun2g02567 | 663 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 25 | 188 | - | - | |
Viun2g02567 | 663 | Pfam | Protein tyrosine and serine/threonine kinase | 368 | 636 | IPR001245 | GO:0004672|GO:0006468 | |
Viun2g02567 | 663 | FunFam | Inactive receptor-like serine/threonine-protein kinase | 338 | 445 | - | - | |
Viun2g02567 | 663 | ProSiteProfiles | Protein kinase domain profile. | 364 | 641 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g02567 | 663 | PANTHER | PROTEIN MALE DISCOVERER 2 | 10 | 663 | - | - | |
Viun2g02567 | 663 | Pfam | Leucine rich repeat N-terminal domain | 27 | 65 | IPR013210 | - | |
Viun2g02567 | 663 | SUPERFAMILY | L domain-like | 26 | 238 | - | - | |
Viun2g02567 | 663 | Gene3D | Phosphorylase Kinase; domain 1 | 338 | 445 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g02567 | Viun-Chr2 | 31744470 | 31749862 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g02567 | 9 | 638 | Receptor kinase-like Gene Family | AT2G01210 | 26.971 | 3.14e-52 | 190 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-2 | Viun2g02567 | PK_Tyr_Ser-Thr | 9.2e-19 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g02567 | - | - | gmx:100794714 | 1217.22 |