Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02567 ATGAAGCCTCGTACTTCATTATGGCTTCTCTCTTTGATTTACACGCTCTCTTTTGTGGCTTCTGACACTGTGCCCTCTAATGAAGTTTGGGCGCTTAGGAGCTTCAAAGAAGCTGTTTATGAAGACCTATATCAAGTTTTGTCCGATTGGGATACGGTAGAAGCAGATCCTTGTAACTGGTTTGGGGTCACTTGCACTATGGTGCGAGATCATGTCATCAAGCTAAACATATCAGGTTCATCATTAAAGGGGTTTCTTGCACCAGAGTTGGGGCAACTCACCTACTTGCAAGAACTAATTTTGCACGGAAACAATCTCATTGGAACAATACCTAGAGAGTTGGGCGAGTTGAAATATCTCAGGGTGTTTGATCTAGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGTTTGGAAATCTAACTCAAGTTGTGAAAATAAACTTGCAGTCCAACGGGTTGACTGGTAGGCTACCTCCAGAGCTTGGAAACTTGAGATTCCTTCAAGAACTTCGGTTGGATAGGAATAGACTTCAAGGACCTATTCCCGCTGGTGGTAGCTCAAATTTTGCTTCATACATGCATGGGATGTATGTTTCCAAGGAGAATGTAACTGGCTTCTGTCGTTCGTCTCAGTTGAAAGTAGCAGACTTCTCATATAATTTTTTAGTTGGTAGCATACCCAAATGCTTGGAGTATCTTCCGAGGTTAAGCTTTCAAGGGAATTGCATCCAGAGCCAGGATATAAAGCAGCGACCTCGTATACAGTGTGCGGGTGCTTCTCCTGCCAGTGCCAAGAGCCAGCCAGTGGTGAATCCAAGTCACCAACCTACTGAATATGTGTCCAAGCATCACGGAGCGTCAAAACCTGTTTGGCTTTTGGCTCTAGAAATAGTAACTGGGACTATGGTGGGCTCTCTCTTTCTGGTTGCTGTTCTTGCTGCTTTTCAGAGATGTAACAAAAAATCATCTATCATCATTCCTTGGAAAAAATCTGGAAGCCAGAAAGATCATACGGCAGTATATATAGACCCTGAGATGTTGAAGGATGTGAGAAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCGGACAGTGTGGTTTACAAGGGAACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATCAGGGAGGAGCATTGGACAGGATATCTTGAGCTCTATTTTCAGAGAGAGGTGGCGGACTTGGCAAGGTTAAATCATGAGAATATAGGAAAACTACTTGGTTACTGTAGAGAAGACGCTCCATTTATAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGACCACCTTCATTGTTATGAAGAAGGATGTCAATTTTCCTGGACACGGCGTATGAAGATTGCCATAGGCATTGCACGTGGACTCAAGTATTTGCATACCGAAGTGGAGCCTCCATTTACTATCTCAGAGCTGAATTCTAGCGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCCATTGGCAGCCAAGGTGCTATCTGTGTTCTTCCAAACTCCCTTGAAGCACGCCATCTTGATACCAAAGGAAACATATTTGCTTTTGGGGTACTTCTACTGGAGTTAATCAGCGGAAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTTGACTGGGCCAAGGACTACCTCGAAAGGCCAGATGAAATGTCAAACGTGGTGGATCCTGAACTGAAGCATTTTAGACATGAAGACCTGAAAGTGATATGCGAGGTAATAACTCTCTGTATCAACCCTGATAAAACTAGGCAGCCATCTATGAGAGAATTATGCAGCATGCTGGAGAACAGAATTGATACATCAGTAAGCGTGGAGCTTAAGTCGTCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCTTAA 1992 0.4332 MKPRTSLWLLSLIYTLSFVASDTVPSNEVWALRSFKEAVYEDLYQVLSDWDTVEADPCNWFGVTCTMVRDHVIKLNISGSSLKGFLAPELGQLTYLQELILHGNNLIGTIPRELGELKYLRVFDLGMNQLTGPIPPEFGNLTQVVKINLQSNGLTGRLPPELGNLRFLQELRLDRNRLQGPIPAGGSSNFASYMHGMYVSKENVTGFCRSSQLKVADFSYNFLVGSIPKCLEYLPRLSFQGNCIQSQDIKQRPRIQCAGASPASAKSQPVVNPSHQPTEYVSKHHGASKPVWLLALEIVTGTMVGSLFLVAVLAAFQRCNKKSSIIIPWKKSGSQKDHTAVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIREEHWTGYLELYFQREVADLARLNHENIGKLLGYCREDAPFIRMLVFDYASNGTLHDHLHCYEEGCQFSWTRRMKIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSIGSQGAICVLPNSLEARHLDTKGNIFAFGVLLLELISGRPPYCKDKGYLVDWAKDYLERPDEMSNVVDPELKHFRHEDLKVICEVITLCINPDKTRQPSMRELCSMLENRIDTSVSVELKSSSLAWAELALLS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02567 663 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Viun2g02567 663 SUPERFAMILY Protein kinase-like (PK-like) 342 638 IPR011009 -
Viun2g02567 663 Gene3D Transferase(Phosphotransferase) domain 1 446 653 - -
Viun2g02567 663 Gene3D Ribonuclease Inhibitor 140 260 IPR032675 -
Viun2g02567 663 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Viun2g02567 663 Pfam Protein tyrosine and serine/threonine kinase 368 636 IPR001245 GO:0004672|GO:0006468
Viun2g02567 663 FunFam Inactive receptor-like serine/threonine-protein kinase 338 445 - -
Viun2g02567 663 ProSiteProfiles Protein kinase domain profile. 364 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02567 663 PANTHER PROTEIN MALE DISCOVERER 2 10 663 - -
Viun2g02567 663 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Viun2g02567 663 SUPERFAMILY L domain-like 26 238 - -
Viun2g02567 663 Gene3D Phosphorylase Kinase; domain 1 338 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02567 Viun-Chr2 31744470 31749862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02567 9 638 Receptor kinase-like Gene Family AT2G01210 26.971 3.14e-52 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Viun2g02567 PK_Tyr_Ser-Thr 9.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02567 - - gmx:100794714 1217.22