Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02565 ATGGATAGTAACGAGGGGAACAAGAAGGAGAAAGACCTTGAGCTTTTTTTTGAGGATGTTATAAACGACGCTGCGCAACTTGATGTTGAAACGGCTAAGTTAGAGAGTGAGAGTAGTAGCAGTGATGAGGAGGAGGAGGAACTTCATCAAACGCACTCTCACTCTTTCACTTCTCTCCAATGGCCCCAAAGTTACAAAGAGACTACAGATTCTTATACACTTGCAGCAACTCCACATTTTGAATCAATTCTACGAGTACCAAGTATTATATTGTCCAGTTTTGAAAATCGTCCAAAGCATAACTTGCAAATAGATGAAAAGACTCCTTTCCTCTCTTGTCCTGAAGTCACTACCCAATCACCATTGCAGAAGGAAGACGCAGCGCAAGGGCATTTAGTAGCCGAATTGCCCGTTAGTCGTGGCTGCAGCTTAATTCAAACAATTTTCAATGCAACTAATGTGATGGCTGGAGTTGGCATTCTCTCAACACCTTACACAATGAAAGAAGCTGGTTGGATTAGCGTGGTGTTGATGGTTCTTTTCGCTGTCATTTGTTGCTATACAGCCACCCTTATGAGATACTGCTTTGAAAGCAGAGAAGGAATCAATAGCTACCCAGATATAGGAGAAGCTGCATTTGGAAAATATGGTCGTATTATTGTATCAATCATCTTGTACACGGAATTATATTCATGTTGTGTAGAATTCGTGACCTTGGAAGGAGACAACCTCACTGGACTATTTCCGGGAACATCCTTAGATTTGGGTGGTTGGCATTTAGATTCTATGCACTTGTTTGGAATTTTTGCTGCACTTGTTTTTATCCCAACTGTTTTGCTGAAGGATCTTCGTATAATCTCTGTACTGTCAGCTGGAGGAGTTTTTGCAACACTGTTGATTGTTATCTGTGTGTATTGTGTTGGGATGATGGATGGTATTGGATTCCATCACAGCACAAAATTTGTCAAGTGGAGTGGCATTCCATTAGCCATTGGTATCCACGGATTTTGCTTTGCAGGCCATTCAGTTTTTCCAAATATTTACCAATCTATGGCTGACAAAACACAATTTACCAAAGCATTAATTGTATGTTTTGCATTGTCTGTTGCAATATATGGAGGTGTTGCTATCATGGGATTCCTCGAGTTTGGCAACGACACCTTGTCTCAAATAACATTAAATTTGCCACGAAATGCATTTGCCTCCAAGGTTGCAATGTGGACAACAGTAATTAACCCATTCACCAAATATGCTTTATTGATGACCCCATTAGCAAGAAGTCTGGAGGAGTTGCTACCAGATAGATTCTCAAGAACTAATCAGTGTTTCGTTCTTATCAGAGTTGCACTTGTTGTATCTACACTTTGTGCCGCTTTTCTGATTCCCTTTTTTGGGTATGTAATGGCTTTAATTGGCTCTCTCTTCAGTATACTTGTGTCAGTGATATTTCCAAGTTTATGTTTTATGAGAATTGTGGGGAAAAAAGCATCGTATACACAGGTTGCGTTGAGCGTGGTAATTACTGCATTTGGAGTAATTTTTGGAGTGCTAGGAACATATTCATCTGTGGTCAATATTGTGAACAGTTACTGA 1593 0.4005 MDSNEGNKKEKDLELFFEDVINDAAQLDVETAKLESESSSSDEEEEELHQTHSHSFTSLQWPQSYKETTDSYTLAATPHFESILRVPSIILSSFENRPKHNLQIDEKTPFLSCPEVTTQSPLQKEDAAQGHLVAELPVSRGCSLIQTIFNATNVMAGVGILSTPYTMKEAGWISVVLMVLFAVICCYTATLMRYCFESREGINSYPDIGEAAFGKYGRIIVSIILYTELYSCCVEFVTLEGDNLTGLFPGTSLDLGGWHLDSMHLFGIFAALVFIPTVLLKDLRIISVLSAGGVFATLLIVICVYCVGMMDGIGFHHSTKFVKWSGIPLAIGIHGFCFAGHSVFPNIYQSMADKTQFTKALIVCFALSVAIYGGVAIMGFLEFGNDTLSQITLNLPRNAFASKVAMWTTVINPFTKYALLMTPLARSLEELLPDRFSRTNQCFVLIRVALVVSTLCAAFLIPFFGYVMALIGSLFSILVSVIFPSLCFMRIVGKKASYTQVALSVVITAFGVIFGVLGTYSSVVNIVNSY 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02565 530 MobiDBLite consensus disorder prediction 28 59 - -
Viun2g02565 530 FunFam Amino acid transporter AVT1A 140 529 - -
Viun2g02565 530 Gene3D Amino acid/polyamine transporter I 139 529 - -
Viun2g02565 530 Pfam Transmembrane amino acid transporter protein 142 522 IPR013057 -
Viun2g02565 530 PANTHER OS05G0424000 PROTEIN-RELATED 147 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02565 Viun-Chr2 31730199 31734588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02565 4 470 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.125 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02565 K15015 - gmx:100816368 833.943