Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02523 ATGGCTCATATGGTTTATGGTGAAACTCCATCTTTTGGAGCTTCCCACCATGGACAGGCTCAGCAAACTATTCCGTTTCCGACCACCGGAACTTCCTTAAGGATTCTGCTCTTACATGGCAACTTGGAAATATGGGTCAACGAGGCCAAAAACCTTCCTAACATGGACATTTTTCACAAGAAAACGGGAGATATGGTTTCCAAGTTGTCCCGAAGACTTGGCGGCAAAGTCGAAGGCATCATGTCCAAAACTGGAACCAGTGATCCCTACGTTACGGTGTCTGTGGCGGGTGCTGTGATTGCCAGAACTTTTGTCATCAGGAACACGGAGAACCCCGTTTGGACGCAGCGTTTCAACGTCCCCGTCGCACACCTTGCTTCTGAAGTCCACTTCGTCGTAAAGGACAGTGATATCGTGGGTTCTCAGATAATTGGAGCGGTGGGAATTCCAGTGGAACAGTTATGTAGTGGCACAAGAGTTGATGGCTTTTTCCCTCTCGTTAGTACTAACGGAAAACCATGTAAGAGTGGAGAAAAGTTGAGTTTATCCATTCAATACACCCCTGTTGAAAAGGTGCCTCTATATATCCATGGAGTAGGTGCTGGTCCTGAATATCAAGGGGTCCCTAACACATACTTTCCCCTTAGAAAAGGTGGAAAAGTTACACTTTATCAAGATGCTCATGTTCATGAAGGCTCCCTTCCCAGTTTGAAGGTGGATGGGGATGTGAATTATAAGCATGAAAGTTGTTGGCACGACATCTTTGATGCAATAAAACAGGCTCGTCGGTTGGTTTACATTGTTGGGTGGTCGGTGTACTATAATGTTAGTCTCATTCGGGACATGGGTGATGGAAAGGCTTACACTTTAGGTGACCTTCTCAAAGCTAAATCACAGGAAGGTGTCAGAGTGCTGCTCCTTGTATGGGATGATCCATCTTCTGGAAGCTTGCTTGGATATAAAACGGTTGGACTTATGAAGACTCATGATGAGGACACTCGCCAGTTTTTCAAGCACTCTTCAGTACAGGTTCTTCTTTGCCCACGAGCTGGTGGCAAGGGACACAGCTTTCTCAAAACGCAGGAAGCTGGAACAATCTATACCCATCATCAGAAAACAGTCATTGTAGATGCTGATGCTGGTCACAATAAAAGAAAGATAAAAGCTTTCATCGGAGGTCTTGATTTATGTGTGGGTCGATATGATACCCCAGACCATTCTCTCTTTAGAACTTTGCAGACAACACACAAAGATGACTATTATAACGCTAACTTTGAGGGTCCTGTCACTGATTGTCCAAGACAACCATGGCATGATTTGCATTCCCAAGTTGATGGACCAGCAGCATATGACATCCTCACCAATTTCCAGGAGCGTTGGTTGAGGGCTATAAAAATGAATAGATTGCGAAGGATGAAAAGCTCGCATGATGATTCACTGCTTAAAATTGATAGAATCGATGACATTGTTGGCATTGATAATGTTCCTGGCCTTAATGAAGATAACCAGGAGACTTGGCATACCCAGATCTTCCGATCAATTGATTCCAATTCTGTGAAAGGATTTCCAAAGCAACCAGAAGATGCTATAAGAAGGAACTTGGTTTGTGGGAAGAATGTGCTGATAGACATGAGCATACATTCTGCTTATGTCAAGGCAATTCGATCAGCCCAAAAGTTCATCTATATTGAGAACCAATACTTTCTTGGTTCATCATATAACTGGGATTCTTACAAGGACCTTGGTGCAAACAACTTAATTCCAATGGAAATTGCATTAAAAATAGCGAGCAAAATCAAACAGCATGAGAGATTCTCTGTGTATATTGTCATTCCTATGTGGCCTGAAGGAGTACCCAAAAGTAAAGCTACTCAGAGGATTCTCTTTTGGCAGTTCAAAACAATGCAAATGATGTATGAAACGGTTTACAAGGCCTTACAGGAGGCTGGGCTTGAGAATCAGTATGAGCCACAGGACTACTTGAATTTCTTTTGCCTTGGTAATCGTGAGATCCCTGACAATAATGTCTCAAATGTTACAAAAACTACCGGAGAAAACATACCACAGGCACTGACTAAAAAGAACCGAAGATTCATGATTTATGTTCATTCAAAGGGGATGATAGTGGATGATGAATATGTGCTACTGGGGTCTGCAAACATCAACCAGAGATCCATGGAAGGCACCAGAGATACAGAGATAGCAATGGGAGCATATCAGCCTAATCACACTTGGGCAAAGAAGCATTCTAAACCTCGCGGACAGGTGCATGGTTATAGAATGTCACTGTGGAGCGAACATGTAGGAAGTGTGGAAGAATGTTTTGAGGAGCCAGAGAGCATTGAGTGTGTGAGACATATAAGGTCATTGAGTGAACGTAACTGGAGACAGTATGCAGCAGATGAAGTAACTGAAATGAAAAGCCATTTATTAAAATATCCGCTTGAAGTTGATTCAAAGGGCAATGTGAAGCCTCTTTCTGGCTGTGAGACATTCCCAGATGTTGGTGGGAACATTAGTGGCACTTTCACAGTACTCAGAGAAAATCTCACCATCTGA 2559 0.431 MAHMVYGETPSFGASHHGQAQQTIPFPTTGTSLRILLLHGNLEIWVNEAKNLPNMDIFHKKTGDMVSKLSRRLGGKVEGIMSKTGTSDPYVTVSVAGAVIARTFVIRNTENPVWTQRFNVPVAHLASEVHFVVKDSDIVGSQIIGAVGIPVEQLCSGTRVDGFFPLVSTNGKPCKSGEKLSLSIQYTPVEKVPLYIHGVGAGPEYQGVPNTYFPLRKGGKVTLYQDAHVHEGSLPSLKVDGDVNYKHESCWHDIFDAIKQARRLVYIVGWSVYYNVSLIRDMGDGKAYTLGDLLKAKSQEGVRVLLLVWDDPSSGSLLGYKTVGLMKTHDEDTRQFFKHSSVQVLLCPRAGGKGHSFLKTQEAGTIYTHHQKTVIVDADAGHNKRKIKAFIGGLDLCVGRYDTPDHSLFRTLQTTHKDDYYNANFEGPVTDCPRQPWHDLHSQVDGPAAYDILTNFQERWLRAIKMNRLRRMKSSHDDSLLKIDRIDDIVGIDNVPGLNEDNQETWHTQIFRSIDSNSVKGFPKQPEDAIRRNLVCGKNVLIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSYKDLGANNLIPMEIALKIASKIKQHERFSVYIVIPMWPEGVPKSKATQRILFWQFKTMQMMYETVYKALQEAGLENQYEPQDYLNFFCLGNREIPDNNVSNVTKTTGENIPQALTKKNRRFMIYVHSKGMIVDDEYVLLGSANINQRSMEGTRDTEIAMGAYQPNHTWAKKHSKPRGQVHGYRMSLWSEHVGSVEECFEEPESIECVRHIRSLSERNWRQYAADEVTEMKSHLLKYPLEVDSKGNVKPLSGCETFPDVGGNISGTFTVLRENLTI 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02523 852 FunFam Phospholipase D 513 744 - -
Viun2g02523 852 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Viun2g02523 852 Pfam PLD-like domain 551 734 IPR025202 -
Viun2g02523 852 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 698 725 IPR001736 GO:0003824
Viun2g02523 852 FunFam Phospholipase D delta 241 479 - -
Viun2g02523 852 Pfam Phospholipase D C terminal 772 842 IPR024632 -
Viun2g02523 852 CDD C2_plant_PLD 36 187 - -
Viun2g02523 852 ProSiteProfiles C2 domain profile. 16 164 IPR000008 -
Viun2g02523 852 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Viun2g02523 852 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Viun2g02523 852 PANTHER PHOSPHOLIPASE D 32 841 IPR015679 -
Viun2g02523 852 SMART pld_4 365 400 IPR001736 GO:0003824
Viun2g02523 852 SMART pld_4 698 725 IPR001736 GO:0003824
Viun2g02523 852 Gene3D Endonuclease Chain A 237 483 - -
Viun2g02523 852 PIRSF PLD_plant 28 852 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Viun2g02523 852 SUPERFAMILY Phospholipase D/nuclease 206 465 - -
Viun2g02523 852 Gene3D Endonuclease Chain A 505 751 - -
Viun2g02523 852 Pfam C2 domain 40 166 IPR000008 -
Viun2g02523 852 SMART C2_3c 41 163 IPR000008 -
Viun2g02523 852 SUPERFAMILY Phospholipase D/nuclease 534 782 - -
Viun2g02523 852 Gene3D C2 domain 35 186 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02523 Viun-Chr2 31493373 31497105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02523 32 852 Phospholipase D Gene Family (Wang group) AT2G42010 67.453 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02523 K01115 - gmx:100786241 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02523 2 31493373 31497105 Viun2g02523 2 31493373 31497105 ECH