Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02504 ATGGAACTTGCATTGCCTTTTGCTCTTATTTTTGCGCTACTTACTGTATGTCCAACAACTTCAGCACACCAAAATCCAGATTTTGCCAAAGCAATAAAACAACATTATCTTCCAACTCAAGAAATCGATGTTCCAAACAGCTTGCTGACTTACATTGTTCGCGTTGAAAAGCCTGATGAGGGTGGTGACTTGTATGCTTGGTACCGTTCGCTTCTTCCATCCAGTTTCGAATCTGACCAGAACCAGCGCCGCATTACTTTCTTATACCGCAACGTGATGAATGGATTCGCAGTGGAATTGACCCCAGAAGAAGCCCAAGCTCTTCAAGACAAGGAGGAGGTTGTGTCAGTGCGTCCTGAAAGGACCTTTCCGTTGCACACAACTCACACTCCAACGTTCTTGGGGTTGCAACAAGGACTGGGATTATGGCGCAATTCCAATTTTGGCAAGGGCATCATAATTGGACTTCTGGACACAGGTATAACCCCTGATCACCCTTCTTTCTCCGATGAAGGAATGCCACTTCCACCGGCAAAATGGAATGGCCTCTGTGAATTCACGGGACGGAGGACCTGCAACAACAAGCTCATCGGTGCGAGAAATTTTGTGAAGAACTCAAACTCAACCCTTCCACTGGATGGTTTTGGACATGGGACCCACACGGCAAGCACAGCCGCCGGAAGGTTTGTGCAGGGTGGTAATGTCTTCGGCAATGCCAATGGTACAGCGGTGGGTATGGCACCTGATGCACACTTAGCAATGTACAAGGTATGTGGCCGCTCAGGTTGTCTTGAAAGTGCAATACTGGCTGGAATGGACACTGCCATTGAAGATGGTGTGGATGTACTTTCTCTCTCCCTTGGAGGACCCTCTTTTCCTTTCTTTGACGATCCAATTGCACTCGGTGCATTCAGTGCAGTTCAGAAGGGAATTTTCGTTAGTTGTTCAGCCGGTAACTCTGGTCCTGATTATACCAGTTTATCTAATGAGGCTCCATGGATTCTCACCGTTGGTGCAAGCACCATTGACAGAAGAATATTAGCAACAGCGAAACTCGGCAACGGGCAAGTGTTCAGCGGGGAATCCATTTTCCAACCACACAACTTCAATCCAACGTTACTACCACTTGTGTATGCAGGTGCAAATGGAAACTCTTCTTCGGCCATTTGTGCTCCTGGATCCTTGGAGAACGTGGATGTGACGGGGAAGGTAGTGTTGTGCGAGGTTGGTGGATTGGTTAGAAGTGTAGACAAAGGACAAGAGGTTAAGAACGGTGGTGGAGTAGCCATGATCCTCATGAACTCAGAAATTGAAGGCTACAATCCCCTTGCCGAGATTCACGTTCTTCCTGCTACACAAGTAAGCTACCATGCTGGGTTAGCCATCAAAAGTTACATAAACTCAACTTCAACGCCAACAGCGACAATCTTGTTCGGAGGAACCGTTATTGGGAGTCTCTTTGCACCTGCAGTTACTTTCTTTTCCTCAAGGGGTCCAAGTTCTGCGAGCCCGGGAATTCTGAAGCCTGACATCATTGGTCCAGGACAGAACATTCTAGCTGCATGGCCCGTGTCTTTGGACAACAACGTGCCTTCGTTCAACATCATTTCTGGCACATCGATGTCTTGTCCTCATCTTGCTGGCATTGCTGCTTTGCTTAAAAACTCTCATCCAGATTGGTCTCCTGCTGCAATAAAATCAGCGATCATGACGAGTGCTAATACAGTGAACCTTGGAGGGAAATCCATATTGGACCAAAGGCTTCTACCTGCTGATGTTTTTGCCACCGGAGCTGGACATGTTAACCCCTTGAAGGCCAATGATCCCGGGCTTGTTTATGATATTCAACCGAATGATTACATTCCTTATTTGTGTGGCTTGAATTACACTGACAAAGAAGTTGGACTGATTTTGAACCAAAATGTGGACTGCTCCGAGGTGAAAACCATACCGGAAGCTCAACTCAATTATCCCTCGTTTTCGATTTGGTTGGGATCAACTCCACAGTTCTACACCAGAACACTCACGAATGTTGGAGCCACCAATGTAACCTACTTTTCGGAAATGGACCCACCTGTGGGAGTAGGCATAAGCATAAGCCCTGCTGAGATAACATTCACAGAGGTGAATCAGAAGGCTACATACACTGTTGGATTTATTCCTGGTGGAGACACAAAGAATCTCACGTTTTCACAAGGCTCTATCAGGTGGGTATCTGGCAAATACTCTGTTAGCATCCCTGTAGCTGCTGTTTTCGTGTGA 2262 0.4682 MELALPFALIFALLTVCPTTSAHQNPDFAKAIKQHYLPTQEIDVPNSLLTYIVRVEKPDEGGDLYAWYRSLLPSSFESDQNQRRITFLYRNVMNGFAVELTPEEAQALQDKEEVVSVRPERTFPLHTTHTPTFLGLQQGLGLWRNSNFGKGIIIGLLDTGITPDHPSFSDEGMPLPPAKWNGLCEFTGRRTCNNKLIGARNFVKNSNSTLPLDGFGHGTHTASTAAGRFVQGGNVFGNANGTAVGMAPDAHLAMYKVCGRSGCLESAILAGMDTAIEDGVDVLSLSLGGPSFPFFDDPIALGAFSAVQKGIFVSCSAGNSGPDYTSLSNEAPWILTVGASTIDRRILATAKLGNGQVFSGESIFQPHNFNPTLLPLVYAGANGNSSSAICAPGSLENVDVTGKVVLCEVGGLVRSVDKGQEVKNGGGVAMILMNSEIEGYNPLAEIHVLPATQVSYHAGLAIKSYINSTSTPTATILFGGTVIGSLFAPAVTFFSSRGPSSASPGILKPDIIGPGQNILAAWPVSLDNNVPSFNIISGTSMSCPHLAGIAALLKNSHPDWSPAAIKSAIMTSANTVNLGGKSILDQRLLPADVFATGAGHVNPLKANDPGLVYDIQPNDYIPYLCGLNYTDKEVGLILNQNVDCSEVKTIPEAQLNYPSFSIWLGSTPQFYTRTLTNVGATNVTYFSEMDPPVGVGISISPAEITFTEVNQKATYTVGFIPGGDTKNLTFSQGSIRWVSGKYSVSIPVAAVFV 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02504 753 SUPERFAMILY Subtilisin-like 125 611 IPR036852 GO:0004252|GO:0006508
Viun2g02504 753 Gene3D Peptidase S8/S53 domain 151 620 IPR036852 GO:0004252|GO:0006508
Viun2g02504 753 ProSiteProfiles Serine proteases, subtilase domain profile. 122 607 - -
Viun2g02504 753 Pfam PA domain 375 462 IPR003137 -
Viun2g02504 753 Pfam Subtilase family 149 576 IPR000209 GO:0006508|GO:0008236
Viun2g02504 753 Pfam Fibronectin type-III domain 654 749 IPR041469 -
Viun2g02504 753 Pfam Peptidase inhibitor I9 51 125 IPR010259 -
Viun2g02504 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 80 749 IPR045051 -
Viun2g02504 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 154 165 IPR023827 -
Viun2g02504 753 FunFam subtilisin-like protease SBT1.5 343 483 - -
Viun2g02504 753 Gene3D - 624 752 - -
Viun2g02504 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 40 126 IPR037045 -
Viun2g02504 753 CDD PA_subtilisin_like 349 476 - -
Viun2g02504 753 Gene3D - 343 483 - -
Viun2g02504 753 CDD Peptidases_S8_3 125 574 IPR034197 -
Viun2g02504 753 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Viun2g02504 753 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Viun2g02504 753 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02504 Viun-Chr2 31413535 31415796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02504 50 739 Subtilisin-like Serine Gene Family AT1G04110 44.762 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02504 - - gmx:100799902 1167.53