Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02491 ATGGATCACGCCCATTCTCTTCCAACTCCTTTCCACGCAGGAAGAGATCTGCACCTGCACCACCAACACCAGTTTCATTCCTTACAACAAAACAACGAAGACGAGCAAAGCGGAAGCAGCGGAGGCCTAAACCTCGCTCACAAAAGAGAACGCGAAGAAAACAACACCACCAACAGCAATAACAGTGAAGGAAAGGAAGGAGGAGGTGCCGGCTCCGGCGAAACCGAGATTTCAAGAAGACCACGCGGAAGACCCGCCGGATCCAAGAACAAGCCCAAACCCCCCATCATCATCACTCGCGACAGCGCCAACGCCCTCAAAACGCACGTCATGGAAGTCGCCGACGGCTGCGACATCGTCGACAGCGTCTCCACCTTCGCCCGCCGCCGCCAGAGAGGCGTTTGCATCATGAGCGGCACCGGAACCGTCACCAATGTTACTCTACGCCAACCTGCTTCTTCCGGCGCCGTCGTCACGCTCCACGGAAGGTTCGAGATCTTGTCCCTCGCCGGATCCTTCCTCCCGCCTCCGGCGCCTCCCGCCGCTACCGGCTTGACGATATACCTGGCTGGAGGACAAGGGCAGGTAGTAGGAGGTAGCGTGGTCGGCGCACTCATTGCTTCGGGGCCTGTGGTTATCATGTCAGCTTCGTTCAGCAACGCTGCGTATGAGAGACTTCCGTTGGAAGATGAAGACCCTTCGATGCCGCTTCAGGGAGGTTCGATTGGGTCACCCGGCGGTGGCGGCGGCGTGGGACAAGCGCAAACGCCTCAGCAGCTTCTGGGGGATTCTACTGCTCCTCTCTTTCACGGTTTGAATCCGAATCTTCTGAATTCCGTTCAGATACCTACGGAAACGTTCTGGGCAACGGGTCCGGGTCGCTCTCCTTACTGA 894 0.5783 MDHAHSLPTPFHAGRDLHLHHQHQFHSLQQNNEDEQSGSSGGLNLAHKREREENNTTNSNNSEGKEGGGAGSGETEISRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVDSVSTFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAATGLTIYLAGGQGQVVGGSVVGALIASGPVVIMSASFSNAAYERLPLEDEDPSMPLQGGSIGSPGGGGGVGQAQTPQQLLGDSTAPLFHGLNPNLLNSVQIPTETFWATGPGRSPY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02491 297 PIRSF ESCAROLA 14 295 IPR014476 GO:0003680
Viun2g02491 297 CDD DUF296 107 190 IPR005175 -
Viun2g02491 297 MobiDBLite consensus disorder prediction 23 97 - -
Viun2g02491 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 232 - -
Viun2g02491 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 253 IPR014476 GO:0003680
Viun2g02491 297 Gene3D - 106 234 - -
Viun2g02491 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 220 IPR005175 -
Viun2g02491 297 ProSiteProfiles PPC domain profile profile. 103 240 IPR005175 -
Viun2g02491 297 FunFam AT-hook motif nuclear-localized protein 106 233 - -
Viun2g02491 297 MobiDBLite consensus disorder prediction 24 43 - -
Viun2g02491 297 MobiDBLite consensus disorder prediction 230 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02491 Viun-Chr2 31340674 31342288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02491 48 290 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 61.887 3.86e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02491 - - gmx:100781436 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02491 2 31340674 31342288 Viun2g02491 2 31340674 31342288 ECH