Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02471 ATGGCAACCACAGTGAAACTTGTTCCACTGTTTCTCATAAACCTTGTAATTTACATGAGTGGCACCGCACAATGTTCCATAACCAAACACTCACACCCTAACCCTGCAGAGTTCGTGAAGTCGTCGTGCAGGGCCACACGGTACCCTGTTTTGTGCGTCCACTCGCTGTTGGCCTACGCCGCCGTCATTCACCGTAGCGACCGGCAACTTGCGATGACCGCTTTGTCGGTGAGCATATCGAGGACCCGATCCTCGGCTTCGTTCCTGAAGAAGATGTCGAAAGCGAGAGGCATGAAGGGTAGGGAGTGGAGAGCGGTGCAAGATTGTGTGGAGACCGTTGGTGACAGCGTGGAGCGTCTGAAGCAATCGGTTAGGGAGTTGGGGCGAACGGGGTTGGGAGAAGACTTCGCATGGCACATGAGCAACGTCCAGACATGGGTTAGCGCCGCCCTAACCGACGACAACACTTGTCTCGACGGCTTCGCCGGTTCCGCCATGAACGGAAACGTGAAGAGTGATATAACGGAGAGGGTTGTCCACGTTGCCCAGGTCACTAGCAATGCTCTCGCCTTGGTTAATCGCTTTGCTTCCAACCACGCTACTCACTCTCCCTAA 615 0.5463 MATTVKLVPLFLINLVIYMSGTAQCSITKHSHPNPAEFVKSSCRATRYPVLCVHSLLAYAAVIHRSDRQLAMTALSVSISRTRSSASFLKKMSKARGMKGREWRAVQDCVETVGDSVERLKQSVRELGRTGLGEDFAWHMSNVQTWVSAALTDDNTCLDGFAGSAMNGNVKSDITERVVHVAQVTSNALALVNRFASNHATHSP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02471 204 NCBIfam pectinesterase inhibitor domain 23 193 IPR006501 GO:0004857
Viun2g02471 204 CDD PMEI-like_3 41 197 - -
Viun2g02471 204 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 196 IPR035513 -
Viun2g02471 204 SMART PMEI_2 34 191 IPR006501 GO:0004857
Viun2g02471 204 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 191 - -
Viun2g02471 204 Pfam Plant invertase/pectin methylesterase inhibitor 38 191 IPR006501 GO:0004857
Viun2g02471 204 FunFam Pectin methylesterase inhibitor 1 34 195 - -
Viun2g02471 204 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 195 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02471 Viun-Chr2 31218880 31219725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02471 33 192 Carbohydrate Esterase AT3G14310 29.193 5.45e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02471 - - gmx:100776636 285.419