Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02462 ATGTTATTTCACCATCCGCATCTGAACAAAATTAACAACCAACCCTCCTCAAAACTTAACATCCTTCAATCTAAACCTTTTACCCAAAAAAATCGGTCTCACACTCTTATATATGGATGCCAAACCCATGCCTTACACTTATCATGTTCCTATCATTCATCATGCCTCACACTTCAACAACTTAAGATGGCTGGGTTCAACTCAGTTCCTAATTGGCTTCTCATTCTGAAGGAGGAGAAATTTTTCACTCGCTGTTTGAGTCATGGCTCTGTAAAAAAGAATGAGAAAAACGTTTTTTGTTTAGATTGCTGCACCAGCATTTGCCTCCACTGTTTACCCTTTCACCGCTCGCACGTCTTTCTTCAGATACGAAGATACATGTACTATGATGTATTGCGGCTTGGTGATGCTGAAACAGTGTTGAACTGTTCCCTTGTTCAACCGTACACAACAAATAAAACCAAGGTTGTGTTTTTGAAACAGAGGCCTCACACTCGTTCTCACAGAGGCTCTAGCAATCTTTGCATCACGTGTGACCGTAACCTCCAAGACCCTTACATCTTCTGCTCTCTGTCTTGCAAGCAGGTGCAGCAACATCTTCTACTGATTACTGAAAGCACAACCATGGAGGGAACTTGCAACAAGTATGAATTCTCTGTGCTGCTCGACAAAGAACGAAGCAGGGAGAACGCGCAGCAAATTGAAGATAGCCAAATCACAACAGATTCAGAACTAGACTCACCCACAGTTTCTGGGTCAACAAGTGTGGCAGAGAGTGTGAATGATTCACTCAAAAAGAAACGTGGCAGTGTTGACCTGGTGCCAGAGATTTGGTACACCATGGTGAACCGGAGAAAGGGTGTTCCTCATCGATCTCCACTGTACTAA 888 0.4313 MLFHHPHLNKINNQPSSKLNILQSKPFTQKNRSHTLIYGCQTHALHLSCSYHSSCLTLQQLKMAGFNSVPNWLLILKEEKFFTRCLSHGSVKKNEKNVFCLDCCTSICLHCLPFHRSHVFLQIRRYMYYDVLRLGDAETVLNCSLVQPYTTNKTKVVFLKQRPHTRSHRGSSNLCITCDRNLQDPYIFCSLSCKQVQQHLLLITESTTMEGTCNKYEFSVLLDKERSRENAQQIEDSQITTDSELDSPTVSGSTSVAESVNDSLKKKRGSVDLVPEIWYTMVNRRKGVPHRSPLY 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02462 295 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 68 294 - -
Viun2g02462 295 ProSiteProfiles Zinc finger B-box type profile. 80 123 IPR000315 GO:0008270
Viun2g02462 295 MobiDBLite consensus disorder prediction 231 261 - -
Viun2g02462 295 MobiDBLite consensus disorder prediction 233 260 - -
Viun2g02462 295 Pfam PLATZ transcription factor 124 194 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02462 Viun-Chr2 31179280 31180720 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun2g02462 PLATZ 6.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02462 - - vun:114173273 587.03