Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02461 ATGTTATTTCACCATCCGCATCTGAACAAAATTAACAACCAACCCTCCTCAAAACTTAACATCCTTCAATCTAAACCTTTTACCCAAAAAAATCGGTCTCACACTCTTATATATGGATGCCAAACCCATGCCTTACACTTATCATGTTCCTATCATTCATCATGCCTCACACTTCAACAACTTAAGATGGCTGGGTTCAACTCAGTTCCTAATTGGCTTCTCATTCTGAAGGAGGAGAAATTTTTCACTCGCTGTTTGAGTCATGGCTCTGTAAAAAAGAATGAGAAAAACGTTTTTTGTTTAGATTGCTGCACCAGCATTTGCCTCCACTGTTTACCCTTTCACCGCTCGCACGTCTTTCTTCAGATACGAAGATACATGTACTATGATGTATTGCGGCTTGGTGATGCTGAAACAGTGTTGAACTGTTCCCTTGTTCAACCGTACACAACAAATAAAACCAAGGTTGTGTTTTTGAAACAGAGGCCTCACACTCGTTCTCACAGAGGCTCTAGCAATCTTTGCATCACGTGTGACCGTAACCTCCAAGACCCTTACATCTTCTGCTCTCTGTCTTGCAAGGTGCAGCAACATCTTCTACTGATTACTGAAAGCACAACCATGGAGGGAACTTGCAACAAGTATGAATTCTCTGTGCTGCTCGACAAAGAACGAAGCAGGGAGAACGCGCAGCAAATTGAAGATAGCCAAATCACAACAGATTCAGAACTAGACTCACCCACAGTTTCTGGGTCAACAAGTGTGGCAGAGAGTGTGAATGATTCACTCAAAAAGAAACGTGGCAGTGTTGACCTGGTGCCAGAGATTTGGTACACCATGGTGAACCGGAGAAAGGGTGTTCCTCATCGATCTCCACTGTACTAA 885 0.4305 MLFHHPHLNKINNQPSSKLNILQSKPFTQKNRSHTLIYGCQTHALHLSCSYHSSCLTLQQLKMAGFNSVPNWLLILKEEKFFTRCLSHGSVKKNEKNVFCLDCCTSICLHCLPFHRSHVFLQIRRYMYYDVLRLGDAETVLNCSLVQPYTTNKTKVVFLKQRPHTRSHRGSSNLCITCDRNLQDPYIFCSLSCKVQQHLLLITESTTMEGTCNKYEFSVLLDKERSRENAQQIEDSQITTDSELDSPTVSGSTSVAESVNDSLKKKRGSVDLVPEIWYTMVNRRKGVPHRSPLY 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02461 294 ProSiteProfiles Zinc finger B-box type profile. 80 123 IPR000315 GO:0008270
Viun2g02461 294 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 68 293 - -
Viun2g02461 294 MobiDBLite consensus disorder prediction 230 260 - -
Viun2g02461 294 MobiDBLite consensus disorder prediction 232 259 - -
Viun2g02461 294 Pfam PLATZ transcription factor 124 195 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02461 Viun-Chr2 31179280 31180720 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun2g02461 PLATZ 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02461 - - vun:114173273 580.482