Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02456 ATGTCGGTTTACAAAGACCAGGATCCTCGTCTTCATGGCATCAAAACTAAGATTCGTGTCGTCCCAAATTTCCCCAAATCCGGTATTATGTTCCAAGACATTACTACTCTATTGCTCGATCCCAAAGCATTTAAGGACACAATCGATTTGTTCGTGGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGAGGTTTTATTTTTGGTCCTCCCATTGCACTGGCTATAGGAGCAAAGTTCGTTCCCTTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCTCAAGAATATATTCTTGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCTGTTGAATCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACGGGAGGAACACTCTGTGCAGCTATGGATTTGCTAGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGCGTAATTGAATTACCGGAATTGAAGACTACTGGTTGCTAG 510 0.4294 MSVYKDQDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVESGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKTTGC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02456 169 CDD PRTases_typeI 48 165 IPR000836 -
Viun2g02456 169 FunFam Adenine phosphoribosyltransferase 1 2 168 - -
Viun2g02456 169 NCBIfam adenine phosphoribosyltransferase 14 166 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun2g02456 169 Hamap Adenine phosphoribosyltransferase [apt]. 14 169 IPR005764 GO:0003999|GO:0005737|GO:0006168
Viun2g02456 169 Gene3D - 2 168 IPR029057 -
Viun2g02456 169 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 166 - -
Viun2g02456 169 Pfam Phosphoribosyl transferase domain 50 162 IPR000836 -
Viun2g02456 169 SUPERFAMILY PRTase-like 12 165 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02456 Viun-Chr2 31158852 31165055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02456 1 165 PRT Gene Family AT1G27450 77.576 1.19e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02456 K00759 - gmx:100306411 322.783