Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02426 ATGGCTTCTCTCTCAGTGTCACTGCAAGTAGTGCTCGTGGTTTTCACCTGCATATTCCATGCAACAACAGTGACGTCTACAGCCCACCACGACCTTACCTTCAGGACATTTTCCGCCAACTCCTCCAAGAACCAGCCCTGGGTCGGACCCATCGGCTACCGTAAAATAACGGTCGACATTAACGGCGGCGGCCACTACCGGTCCGTTCAAGACGCCGTGGATGCCGTCCCAGACAACAACAGAAGGAATATCCTCATTCAAATCAACGCCGGATGCTACAAAGAAAAGGTGGTGGTACCCGTGACGAAGCCGTACATAACGTTTGAGGGTGCGGGTAAAGAAGTGACTGTGATAGAATGGCACGACCGAGCCAGTGACCCTGGTCCCAGTGGACAGCAGCTTCGTACTTACAGAACCGCTTCTGTTACTGTTTTTGCCAGCTATTTTTCTGCCAGGAACATCAGCTTCAAGAACACAGCGCCGGCACCGATGCCGGGGATGCAGGGATGGCAGGCGGTGGCGTTTCGCATTTCCGGCGACAAGGCATATTTCTCCGGCTGCGGGTTCTACGGTGCACAGGACACACTTTGTGACGATGCTGGTAGACATTACTTCAAGGAATGCTATATTGAAGGATCCATCGATTTCATTTTTGGCAATGGCAGGTCCATGTACAAGGATTGCTGGCTGCACTCAATAGCAAGCAGGTTTGGGTCGATAGCGGCCCAAGACAGGAAGCAGGAGGAAGAGAAGACAGGGTTCGCATTCGTGGGATGCAGGGTGACAGGTACAGGTCCATTGTATGTGGGACGAGCAATGGGACAGTATTCCAGAATCATCTATTCCTACACATACTTCGATGACATTGTTGCACATGGTGGTTGGGATGATTGGGACCATGCCGACAATAAGAATAAGACCGTGTTCTTCGGAGTGTACAAGTGTTGGGGACCAGGAGCAGAGGCTGTAAGAGGGGTTTCACTGGCACGAGACTTAGATTTTGAAACGGCTCATCCATTTATCAGGAAGAGTTTCGTCAATGGCAGACACTGGATTGCACCATCTGATGCTTAG 1074 0.5121 MASLSVSLQVVLVVFTCIFHATTVTSTAHHDLTFRTFSANSSKNQPWVGPIGYRKITVDINGGGHYRSVQDAVDAVPDNNRRNILIQINAGCYKEKVVVPVTKPYITFEGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTVFASYFSARNISFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCWLHSIASRFGSIAAQDRKQEEEKTGFAFVGCRVTGTGPLYVGRAMGQYSRIIYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSLARDLDFETAHPFIRKSFVNGRHWIAPSDA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02426 357 FunFam Pectinesterase 52 354 - -
Viun2g02426 357 Pfam Pectinesterase 56 348 IPR000070 GO:0030599|GO:0042545
Viun2g02426 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 52 353 - -
Viun2g02426 357 Gene3D - 53 356 IPR012334 -
Viun2g02426 357 ProSitePatterns Pectinesterase signature 2. 210 219 IPR033131 -
Viun2g02426 357 SUPERFAMILY Pectin lyase-like 55 354 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02426 Viun-Chr2 31032957 31035682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02426 1 357 Carbohydrate Esterase AT5G47500 71.892 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02426 - - gmx:100816190 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02426 2 31032957 31035682 Viun2g02426 2 31032957 31035682 ECH
Viun2g02426 2 31032957 31035682 Viun3g04163 3 49279165 49282809 PCT