Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02403 ATGAGTAGGGGAACTATGGAAGATGTGGCAATAATTGGAGGATTGGTTGGAGTCCAATTTATTTATGCAGGAAATGCTGTGTTCATGGGTTATGCACTGTCATTAGGCTTCAGCTCTCTCACCATTATCATTTTGACATCTTTGGCTACATTCCTTATTCTGTTCCCCGTTTCATTTTTCTTTGAAAGGACTAAGTGGCCGAAGAATTGTGATTTCAAGTTGACTAAACAGCTATTATGTCTATCGTTTGGAGGACTGCTGTTCCAGTATTTATTCCTCAAAGGACTCGATCTAACTTCGCCAGCAATGGGAACTGCTATGCCAAACATTGCCCCAGGTCTTATCTTCCTCATTGCATGGATTTCTGGGTTAGAGAAAGTGGACTTAAGGAATCAGTATAGCAAAGTAAAAATCATGGGAACAGTGCTCTGTGTCTTGGGAGCTCTCACAATGAGCATAATGCAAAGCATTTCGACTGGTGCACCGGAGAAAAATTCCACATTTCCATTATCAAAGACTCCGTCAGGTTTTGTCTTTAACACGCAAAAGATGATCGGTTGCTTCTATCTCGTGGTTGCAGTCGTGATTTTGTCGAGCAACGTCGTTCTGCAGGCTTTTACTCTCGGAGATTTTCCGGCACCGATGTCCTTGGGTGCAGTAACGTCCTTGTTGAGCGCATTCATGACTGCAACCGTTCAGGTACTTGAAAAACACAGGCTGAAAACTGGGCAGCTTCTTGTGAGGTCTGGAAATTTAATTGGCTATTTTATTCTGGCAGGTGCTGTGAGTGGAATATGCCTGAGTTTCAACGGGTGGGCACTGAAGAAAAAAGGGCCAGTGTTTGTCTCCATGTTTAGCCCCATTGGTACAGTGTGCTCTGTAATTTTCGCGGTTATTAAACTTGGAGAAAGTATGAGTACCGGAAGTCTTGGAGGCATGTTTCTCATGTTCAGTGGACTCTACTTGGTTCTCTGGGCTAAAGGGAAAGAAGGACTGCCAAATGGAGATAGCTTAGAGAAACATTGA 1026 0.4347 MSRGTMEDVAIIGGLVGVQFIYAGNAVFMGYALSLGFSSLTIIILTSLATFLILFPVSFFFERTKWPKNCDFKLTKQLLCLSFGGLLFQYLFLKGLDLTSPAMGTAMPNIAPGLIFLIAWISGLEKVDLRNQYSKVKIMGTVLCVLGALTMSIMQSISTGAPEKNSTFPLSKTPSGFVFNTQKMIGCFYLVVAVVILSSNVVLQAFTLGDFPAPMSLGAVTSLLSAFMTATVQVLEKHRLKTGQLLVRSGNLIGYFILAGAVSGICLSFNGWALKKKGPVFVSMFSPIGTVCSVIFAVIKLGESMSTGSLGGMFLMFSGLYLVLWAKGKEGLPNGDSLEKH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02403 341 PANTHER WAT1-RELATED PROTEIN 14 330 IPR030184 GO:0016020|GO:0022857
Viun2g02403 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 153 - -
Viun2g02403 341 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
Viun2g02403 341 Pfam EamA-like transporter family 184 324 IPR000620 GO:0016020
Viun2g02403 341 Pfam EamA-like transporter family 17 152 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02403 Viun-Chr2 30983818 30986523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02403 1 341 Nodulin-like Gene Family AT5G47470 56.851 3.13e-133 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02403 - - gmx:100784734 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02403 2 30983818 30986523 Viun3g04155 3 49218533 49221627 PCT