Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02402 ATGAGTAGGGGAACTATGGAAGATGTGGCAATAATTGGAGGATTGGTTGGAGTCCAATTTATTTATGCAGGAAATGCTGTGTTCATGGGTTATGCACTGTCATTAGGCTTCAGCTCTCTCACCATTATCATTTTGACATCTTTGGCTACATTCCTTATTCTGTTCCCCGTTTCATTTTTCTTTGAAAGGACTAAGTGGCCGAAGAATTGTGATTTCAAGTTGACTAAACAGCTATTATGTCTATCGTTTGGAGGACTGCTGTTCCAGTATTTATTCCTCAAAGGACTCGATCTAACTTCGCCAGCAATGGGAACTGCTATGCCAAACATTGCCCCAGGTCTTATCTTCCTCATTGCATGGATTTCTGGGTTAGAGAAAGTGGACTTAAGGAATCAGTATAGCAAAGTAAAAATCATGGGAACAGTGCTCTGTGTCTTGGGAGCTCTCACAATGAGCATAATGCAAAGCATTTCGACTGGTGCACCGGAGAAAAATTCCACATTTCCATTATCAAAGACTCCGTCAGGTTTTGTCTTTAACACGCAAAAGATGATCGGTTGCTTCTATCTCGTGGTTGCAGTCGTGATTTTGTCGAGCAACGTCGTTCTGCAGGCTTTTACTCTCGGAGATTTTCCGGCACCGATGTCCTTGGGTGCAGTAACGTCCTTGTTGAGCGCATTCATGACTGCAACCGTTCAGGTACTTGAAAAACACAGGCTGAAAACTGGGCAGCTTCTTGTGAGGTCTGGAAATTTAATTGGCTATTTTATTCTGGCAGGTGCTGTGAGTGGAATATGCCTGAGTTTCAACGGGTGGGCACTGAAGAAAAAAGGGCCAGTGTTTGTCTCCATGTTTAGCCCCATTGGTACAGTGTGCTCTGTAATTTTCGCGGTTATTAAACTTGGAGAAAGTATGAGTACCGGAAGTCTTGGAGGCATGTTTCTCATGTTCAGTGGACTCTACTTGGTTCTCTGGGCTAAAGGGAAAGAAGGACTGCCAAATGGAGATAGCTTAGAGAGTGAGTTTGACATAGAGAGGCCTCTTTTGTGTTAA 1053 0.4349 MSRGTMEDVAIIGGLVGVQFIYAGNAVFMGYALSLGFSSLTIIILTSLATFLILFPVSFFFERTKWPKNCDFKLTKQLLCLSFGGLLFQYLFLKGLDLTSPAMGTAMPNIAPGLIFLIAWISGLEKVDLRNQYSKVKIMGTVLCVLGALTMSIMQSISTGAPEKNSTFPLSKTPSGFVFNTQKMIGCFYLVVAVVILSSNVVLQAFTLGDFPAPMSLGAVTSLLSAFMTATVQVLEKHRLKTGQLLVRSGNLIGYFILAGAVSGICLSFNGWALKKKGPVFVSMFSPIGTVCSVIFAVIKLGESMSTGSLGGMFLMFSGLYLVLWAKGKEGLPNGDSLESEFDIERPLLC 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02402 350 PANTHER WAT1-RELATED PROTEIN 14 331 IPR030184 GO:0016020|GO:0022857
Viun2g02402 350 Pfam EamA-like transporter family 17 152 IPR000620 GO:0016020
Viun2g02402 350 Pfam EamA-like transporter family 184 324 IPR000620 GO:0016020
Viun2g02402 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 153 - -
Viun2g02402 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02402 Viun-Chr2 30983817 30986023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02402 1 341 Nodulin-like Gene Family AT5G47470 56.268 6.45e-131 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02402 - - gmx:100784734 508.834