Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02368 ATGTACGAAGAAACTACCTACGAGTCCGATTTGGCTCTTTTGGATTCCATTCGCCGCCACTTACTCGGGGACTCCGAGGATCTCAAATTCGGACCCCCGATTGTTAACTCGGGTAACACCCCCCTTTACTCTCGGAGCTCCAGTTTCGGTAGGTTGTACCCGTGTTTGAGTAACGACTGGGGAGAACTTCCTCTTAAGGAAGATGATTCAGAGGACATGGTGCTCTACGGTGTTCTTCGCGATGCCGTCAACGTAGGGTGGGTCCCCTCTCTCAACGCGGACTCACCGGACAGTTATTCCTCGGGTTCCATCCCGGAAGTGACCGTGAAACCCGAACCGGATATATTTCCGGCACCGGAACCTGTTTTCACTCCCCCGGTGGTTCAGGATGCACCGGCGGTTGTTCCGGCGAAGGGGAAGCACTACCGCGGCGTGAGGCAGCGGCCGTGGGGAAAATTCGCGGCGGAGATCCGCGACCCGGCTAAAAACGGGGCTCGGGTTTGGCTCGGGACGTTTGAGACGGCTGAGGACGCCGCACTGGCTTACGACCGAGCCGCGTACCGAATGCGCGGCTCGCGGGCTTTGTTGAATTTCCCGCTTCGGATTAATTCGGGCGAGCCCGAACCGGTTCGGGTGACGTCGAAGCGAGCGTCGCCGGAGCCCTCGTCTTCGTCGGAGAGTGGATCGTGTGGTAAACGGCGGAAGAAAGTGGTGGGGCCGAGGGTGACGGCTCCTAGTGGGTTGAGAACGGGGCAAGGGAAGTCAAGTGGCTCAGTGCACACGTGCGGAACAGTTGTTGGTTAA 804 0.5871 MYEETTYESDLALLDSIRRHLLGDSEDLKFGPPIVNSGNTPLYSRSSSFGRLYPCLSNDWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLNADSPDSYSSGSIPEVTVKPEPDIFPAPEPVFTPPVVQDAPAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTSKRASPEPSSSSESGSCGKRRKKVVGPRVTAPSGLRTGQVXKSSGSVHTCGTVVG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02368 268 ProSiteProfiles AP2/ERF domain profile. 141 199 IPR001471 GO:0003700|GO:0006355
Viun2g02368 268 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
Viun2g02368 268 FunFam Ethylene-responsive transcription factor 2 140 200 - -
Viun2g02368 268 MobiDBLite consensus disorder prediction 205 268 - -
Viun2g02368 268 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Viun2g02368 268 PRINTS Ethylene responsive element binding protein signature 165 181 IPR001471 GO:0003700|GO:0006355
Viun2g02368 268 PANTHER DNA-BINDING DOMAIN 136 226 IPR044808 GO:0003700|GO:0009873
Viun2g02368 268 Gene3D AP2/ERF domain 140 202 IPR036955 GO:0003700|GO:0006355
Viun2g02368 268 MobiDBLite consensus disorder prediction 249 268 - -
Viun2g02368 268 SMART rav1_2 141 205 IPR001471 GO:0003700|GO:0006355
Viun2g02368 268 Pfam AP2 domain 141 191 IPR001471 GO:0003700|GO:0006355
Viun2g02368 268 SUPERFAMILY DNA-binding domain 141 201 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02368 Viun-Chr2 30780947 30782372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02368 8 239 AP2-EREBP Transcription Factor Family AT4G17500 56.126 1.15e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Viun2g02368 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02368 K09286 - gmx:100819649 386.726