Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02367 ATGGCTTCCTTAACCCTCCTTTTACCAGCACTTATCTGTCTTCAATTTCATCTTCTTTCATTAGCTGTTGCAGACGTTAATATTGGTTCCAGAATTTCCACCGACGACAATGGAGTGTGGCGTTCACCTTCGGGTCATTTTGCTTTTGGGTTTCGCGCATTGAATAATAACACGGATCCCAATACGAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAGGACCGTTGTTTGGAGTTTAAAAACCGACAACAAACTTGCAACAGCAGCAGCGGGATCACAGGTTCGGATCACTTCGGCGGGGCTAACACTGGCAGGTCCCGAAGGAAATTCCATATGGGAATCAAACCTTGCAAGTGTTGTCTCCGTAGGTTCTATGCTTGACACTGGCAACTTTGTTCTACTGAATGGGAACTCTGAAATGGTGTGGCAAAGTTTTGAGAACCCCACAGACACGTTGTTGCCTACCCAATCTCTCCAACCTGAAGCCACGCTAACATCTCGATTAACAGACACTAATTATACCACCGGAAGGTTCCAACTTTATTTCAAGGATGGTAATGTCTTACTGAGTCCTCTTTCCTGGCCTTCTTCACTGCGCTACACCTCGTACTATGTGTTGAATGCCTCTGCTTCTGCTTCAACGTTGGTGTTCAATGAATCCGGGGATATCTATGTAAACACCACAAATGGGGCTATGATCCAACCTCAAGGTTCCCAATGGAATATCTCGGATCTGGATCCTGAGGTGAATTACTACAGAGCAACGCTTGACTTCGCTGGAGTTTTCACGCAGTATTCTCATCCACGGAACAACACTGCCCAGCCAGGGTGGAGAATCATGAGGTATGTTCCTGACAACATTTGCACTGCAATATCTTATGAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCGCCATGGAAAATCAGAGGCCTACCTGCAAATGCCCTTATGGGTATTCCATGCTGGATCCAAGTAATCAATTCGGTGGATGCCAACCCAATTTCACCCTTGCTTGTGGAGCCGATGTTCAAACACCGCCAGAAGAATTATACGAAATGCATGCATCTCAAGATTTTAATTTTCCTGAGGGAGATTACGAAAGGATACAACCTTACTCAAAGCAGGAATGCCAGCAATTTTGCTTGCAGGATTGCATGTGTGCTATGGCCGTTTCAGGTGGCGACACTTGTTGGTTGAAGAGATTTCCCCTTGGTAACGGTAGACAAGAAACAGTGAGTGATCAACATGTTGTCTATATCAAAACAAGAGTTACTCGCGACTTTTATACAGGTGTAAACGGGGAACCTTCCCCTGCTCCGGATTCAAAGAAAGAATTTGTTTTGGGACCGCTAATTGGTTCTCTTGTCCTTAACGGTATTCTTGTTTCTACAGTTGCTTTGTTTTTTCTCAAGAAACAGAAAGTGAATAGGGTTTCCAAAGCCGCCTCTGGTCCTTCGGAAACAAATTTGTATTCGTTCACTTATGAAAGTTTGAAAAAGGCCACACAGAATTTTCAGGAGGAATTAGGCAGAGGTTCTTATGGCATTGTTTACAAAGGACAACTAGAAGAAGGTTCTTGTCATGTGGTTGCTGTGAAGAGATTGGACAGATTGGTAGACGAACGAGAGAAAGAATTTAGGAGTGAATTGAGCTCTATCGGTAGAACCTGCCACAAAAATCTGGTGAGGTTGATAGGGTTTTGTGACGAGGGAATGAACAGAATATTGGTGTACGAGTTCATGAGCAATGGTAGTCTTGCAGACATGCTGTTTGGGCAATCGAAGCCCAGATGGAGTGTAAGGGTTGGATTTGCTATGGGGATTGCAAGAGGGTTGGTGTACTTGCACGAAGAGTGTGAGAGTCCCATTATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAGTATTTGAATCCAAAAATATCTGATTTTGGGTTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACGACGACGATGATCCGAGGAACTCGAGGATACGTGGCTCCTGAATGGTTTAAGAATGTCGGCGTGACGGTTAAAGTGGATGTTTATAGCTTTGGGGTAATGTTGTTGGAAATAATTTGCAGTAGAAGTGTGTTGATGATGGAGTGTGGGGAAGAAGAGAAGGCAGTGCTGACAGATTGGGCTTGTGATTGCTTTGTGGAAGGGAGAATAGATGTTCTGGTGGAGAATGATGAAGAGGCCATATCTGATTACGTGAGGTTACAGAAATGGGTGAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGAATGGTAATGCAAATGCTTGAAGGTTTTGTTGAAGTGCCTAACCCACCATCTCCTTTTCTCATGCGTTCCATGTCTCAACTAAACAAGTTGGTGGCCAAAACATGA 2424 0.4394 MASLTLLLPALICLQFHLLSLAVADVNIGSRISTDDNGVWRSPSGHFAFGFRALNNNTDPNTKLFMVAIWYDMIPDRTVVWSLKTDNKLATAAAGSQVRITSAGLTLAGPEGNSIWESNLASVVSVGSMLDTGNFVLLNGNSEMVWQSFENPTDTLLPTQSLQPEATLTSRLTDTNYTTGRFQLYFKDGNVLLSPLSWPSSLRYTSYYVLNASASASTLVFNESGDIYVNTTNGAMIQPQGSQWNISDLDPEVNYYRATLDFAGVFTQYSHPRNNTAQPGWRIMRYVPDNICTAISYEYGSGSCGYNSYCAMENQRPTCKCPYGYSMLDPSNQFGGCQPNFTLACGADVQTPPEELYEMHASQDFNFPEGDYERIQPYSKQECQQFCLQDCMCAMAVSGGDTCWLKRFPLGNGRQETVSDQHVVYIKTRVTRDFYTGVNGEPSPAPDSKKEFVLGPLIGSLVLNGILVSTVALFFLKKQKVNRVSKAASGPSETNLYSFTYESLKKATQNFQEELGRGSYGIVYKGQLEEGSCHVVAVKRLDRLVDEREKEFRSELSSIGRTCHKNLVRLIGFCDEGMNRILVYEFMSNGSLADMLFGQSKPRWSVRVGFAMGIARGLVYLHEECESPIIHCDIKPQNILIDEYLNPKISDFGLAKLLLSDQSRTTTMIRGTRGYVAPEWFKNVGVTVKVDVYSFGVMLLEIICSRKXVLMMECGEEEKAVLTDWACDCFVEGRIDVLVENDEEAISDYVRLQKWVKIAIWCIHEQPEMRPTMGMVMQMLEGFVEVPNPPSPFLMRSMSQLNKLVAKT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02367 808 Pfam D-mannose binding lectin 78 165 IPR001480 -
Viun2g02367 808 CDD STKc_IRAK 515 783 - -
Viun2g02367 808 Pfam Protein kinase domain 512 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02367 808 SMART blect_4 30 152 IPR001480 -
Viun2g02367 808 SUPERFAMILY Protein kinase-like (PK-like) 491 781 IPR011009 -
Viun2g02367 808 ProSitePatterns Protein kinases ATP-binding region signature. 515 539 IPR017441 GO:0005524
Viun2g02367 808 Gene3D Phosphorylase Kinase; domain 1 472 586 - -
Viun2g02367 808 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 792 - -
Viun2g02367 808 ProSiteProfiles Bulb-type lectin domain profile. 30 150 IPR001480 -
Viun2g02367 808 Gene3D - 151 278 IPR036426 -
Viun2g02367 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Viun2g02367 808 Gene3D Transferase(Phosphotransferase) domain 1 587 785 - -
Viun2g02367 808 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 788 - -
Viun2g02367 808 PIRSF SRK 1 807 IPR024171 GO:0004674
Viun2g02367 808 FunFam S-receptor-like serine/threonine-protein kinase 478 586 - -
Viun2g02367 808 Gene3D - 24 150 IPR036426 -
Viun2g02367 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 170 IPR036426 -
Viun2g02367 808 ProSiteProfiles Protein kinase domain profile. 509 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g02367 808 SMART serkin_6 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02367 Viun-Chr2 30775005 30777742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02367 495 782 Receptor kinase-like Gene Family AT1G60800 43.390 4.45e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun2g02367 Pkinase 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02367 - - gmx:100789263 1140.56