Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02362 ATGTGCCGGCAGAATTCTCTGGAGCACCATTCCGGTGAAGAAGAAATAGCAGCTGACGAGAGCCTTTTGGTTTATTGCAAGCCTGTTGAACTGTACAACATTCTCTACCGTCGTGGTCTTCAAAATCCTTCCTTTCTTAGCAGATGTTTGCGTTATAAAATTACAGCAAGGAAGAAAAGGAGGTTGAGAGCAGGAATAGTGATTTTCAATTATAGGGACCGCTACAACATGCTTCGGAAGACAGAAGTGACTGAAGACTTTTCTTGCCCGTTTTGCTTGATGCAGTGTGGAAGCTTTAAGGGTTTGCGACTTCATCTATGTTCATCACATGATCTATTCAACTTTGAGTTCTGGGTCACTGAAGATTACCAAGCAGTGAACGTCTCAGTGAAAATGGATATATTGAGATCAGAGAATGTTGCTGATGGAATAATTCCACAATTGCAAACCTTCTTTTTCTGTTCAAGGCCTCGAAAGCGTAGAAGAAAGGACTCTGTTCAAAATGAAAAGCGCAGCAATGTAAAATTCATGGAGTTGGATTCACCTGAAGACATACCGAATGGATTTATGCAAAAGGATGATGATATCCTATGCTGCAAAGGGGAAAATGTGTCTAGAACATCTCGTAATGAGAAGATACTGCTTAGTGGAAGAAATGATGGAGGGAAATTGGGTCCTGATCATCTTGGCACCATGGACGATCTGGAGCATGTTGAATCCAGTTTCAACATTTCTGGTGTTTCGATTGCAATGCCTCATTCTTCTGGAGACCCTGAATGTAGTAAACCAATTTGTAAAAGTGATCCTGCTCTGCCTGTTAAATCAAAGAAACTAAGCATGGATCGCTCAGACTCAAGAAACCGAATGCTTCTGCAGAAAAGACTGTTCTTTCACTCGCATAGGGTCCAGCCTATGGCACCGGAACAAGTGTTGTCAGACCGTGATAGTGAAGATGAAGTTGACGATGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAACAGGTCATGCATCTCTGGAACTCCTTTATGAGGAAGCAAAGAGTGCTTGCGGATGGTCATGTTCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAAATCTGGTCACATCTCCAACTTTATTCTGCAGGTGTTGGAGGTTATTGATGGTTAAACTTTGGAATCATGGTCTTCTTGATGCCGGCACGATGAACAACTGTAACAGGATATTAGATAGTTACAGAAACGAGGGATTGGGTACTAGCAAATAA 1287 0.4196 MCRQNSLEHHSGEEEIAADESLLVYCKPVELYNILYRRGLQNPSFLSRCLRYKITARKKRRLRAGIVIFNYRDRYNMLRKTEVTEDFSCPFCLMQCGSFKGLRLHLCSSHDLFNFEFWVTEDYQAVNVSVKMDILRSENVADGIIPQLQTFFFCSRPRKRRRKDSVQNEKRSNVKFMELDSPEDIPNGFMQKDDDILCCKGENVSRTSRNEKILLSGRNDGGKLGPDHLGTMDDLEHVESSFNISGVSIAMPHSSGDPECSKPICKSDPALPVKSKKLSMDRSDSRNRMLLQKRLFFHSHRVQPMAPEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQVMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKNLVTSPTLFCRCWRLLMVKLWNHGLLDAGTMNNCNRILDSYRNEGLGTSK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02362 428 CDD ZnB-Zn_EMF2-like 13 134 - -
Viun2g02362 428 CDD VEFS-box_EMF2-like 291 419 - -
Viun2g02362 428 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Viun2g02362 428 Pfam VEFS-Box of polycomb protein 278 414 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02362 Viun-Chr2 30749820 30758982 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02362 1 68 C2H2 Transcription Factor Family AT5G51230 57.353 4.00e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02362 - - gmx:100807112 752.281