Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02345 ATGGCAACTCCAGAAAATAATGGTCACTCGAACGAAGAAAGATATGGCTCATTGATGAAAAGTGGGGCCACTTCCCCCGTTAGGCCAGTGTTTAAGCGGCGTAAAGTTTCCGCCACTCGTGATTTTCCTGATGGGTGTGGACCATATGCTTCAAGGATTGATGAAGTATCAAATATAAATACTGCAGGTTGTGGTCCTATTAATGGTACAATTGTTGAGGTTAAGAATGGTGAACATTTAGCGGGCGTGAAAAGTTGCACCTGTGAAAATGATGTTTGGCAGTCGGAGGTAAAAGGTTTTCTTCTTATGGAGACTCTTGGCCCAACAGCTGACAGTGGTTTGGATAAGGACAACCACATGGTCTCATCTTATCATGTGGATGGATCTACTGCTAAAGATAAACCGGGAATAGTGACTACTAGACAAATAAATGATTGTGAATCTACTGCTGAAGATAAACCGGGAGTAGTGACTAATAGCCAAACCACTGATCGTGGTTTGAACAAGGAAAGCCCTGTAGACACATCTCATAGAGTGGATGAACATATTACCGAAGATGAAGCTGCAAAAGTGACTCTTGGGCGAACAACTGAATGTAGTTTGAATCAGGAAAACCCTGTGGTCTCATCTCATCAAGTAGATGGGTCTACTCCAGAAGATAACCCTGCAGAAGTGAAGCTTGGCCAAACAGGGGACTGCAGTTTGAGTCTGAAAAACCGCGAGGTCTCATCACATCAAGTGAATGGGTGTATTGCAGAAGATAAACTGGCAAAAGTGACTGGTGAGCGAACAACTGACTGTGGTTTGAATAAGGAAAACCCCGTGGTCTCATCTCGTCTAGTGGATGGCCCTACTGCAGAAGATAAACCTGCAGAAGTACCTTTAATGGACCACGAAACTCTGAATACAGAATTTGCAAGAACTGCAAACACTGGAAAATGTGACTCCTCATATGTGTTGGAGTCGTCTTCACCAGTGGTTGAGATGGCTGTGCCTGATGATTCAAAACACTTATTATCCATTGATAATATATCTGCTTCCAGTGCTTGTATGGTGGAGCCTATAACTAGAAGGTATCTTCCACAAAGAAAAGTTTCAGCTGTTAGAAACTTCCCTCCTTTATGTGGACGTAATGCTCCACGTCTGGGTAAGGACAAACATGTGTGTCTAGAGGGGACCTCTTCTTTGAATAACAAGACAGAAGGTCAACAGAACCTGGCTGTAGATGACAATCCGTTGAAAAAAGTAGCAACTACTGATGTAAAAGAAGGTAAAAGTAATATTCAGGATGAATATAATTGCAAGAGAAAGCTTGTTGATATCGATCAACTTGATTCTGAAAGACATTCTGCAGAGAGATTGAAAAAGCTGCGTGCCTGTAGTCCATCGTCTGAGATGAAAAAGTCACCTGAAGTTGAAAGAGAAAAGTATGCATCACCCCCTGAAACAAGTAATCATCATCAGATCAAAATAAATTCTAAGACGGTGGTAAAAGAGAAAAATAGGGATGAGACAAAGCCTTCGAGTATATCTCAATCTAAGCATAAGTTGAAAGGCAATTTTAATAGATTGCAGGTCACATCACAGAGGAAAGTAATACTAGGTTTGATGACTGATTCAGAATGTCCGTGGAGGTCTGATAAAGGTACCTCCAAATTGAAGTTGGTTGCTGGTAATAGTAAAGGCAAGAGAAAGAAAGGGGATTCTTTTGCATTGCCTGATAGTTCTAGAACAGAGTATAGTGGCTTGTTGAATGATTCTGAAAAGAAGCCTTTGAAAAAGAAAAAGGGAAGTCCTGCTTCTGAAGGTATGGGTGAATTAGTACTTTGGGAAAAGGAGGATTATCTTAACCCTAATGAAAATGTTGACCCTCTTCAAATTGTTCTGAGATCAAATGAGTTTGATGTAAACCTTACTCCCTCTTCTCATTCTAATTTCACTGGTGATGAGAATGACCCAAATGTGACCCGAAAAAAAGTGAGGGAAACATTACGGTTGTTTCAAGTTATTTGTAGAAAGCTTCTACAGGAAGTAGAATCAAAGTTAAATGAGCGAGCAAATAATAAGAGAGTTGATTTAGTTGCTTCAAAGATCCTCAAGGAGCATGGGAAATATATCAACACAGGCAAGCAAATACTAGGCTGTGTCCCTGGTGTTGAAGTTGGCGATGAATTTCAATATAGAGTGGAGCTTAATATAGTTGGCCTTCATCGTCCAATTCAAGGTGGCATAGATTATGTGCGACACAACGGTAAGGTCCTTGCAACCAGTATTGTTGCATCAGGGGGCTATGCTGACGATTTGGATAATTCGGATGTATTGACATATACAGGGCAGGGTGGAAATGTGATGAACAGTGATAAAGAACCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGATGAACAGTAGTATTGAAAAGAATCCTGTTAGAGTAATTCGTGGCTGTGAGTCAGTGGATGCAAAATGCAGGACTTATGTTTATGATGGGCTGTATGTAGTCGAGGCAGGTTGGGATGAACACGGACCACATGGGAAGAAAATTTTTAAATTTCGACTGCTAAGAGAACCTGGTCAACCAGAGCTTCCTTTTAGAGAAGTGAAGAAATCTAAAAAGTTCAAAACTAGAGAAGGTGTATGTGTTGCTGATATTTCTCTTGGAAAGGAACGAATTCCAATATGCGCCGTGAACACCATAGATGATGATAAACCTCCTCCGTTTAATTACATAACTAGCATGATATACCCCAAATTCCATCTCCTTCCTGCCGAAGGATGTGATTGTATTAATGGATGCTCAGATGTGGAAAAATGTTCGTGCGTAGTGAAGAATGGGGGAGAGATTCCATTCAATCACAATGGGGCTATTGTACAAGCAAAGCCTCTAGTCTATGAGTGTGGACCTACTTGTAAGTGTCCTTCAACGTGCTACAATAGAGTCAGCCAACTTGGCATAAAGTTTCAACTTGAAATATTTAAAACCCAGTCAAGGGGATGGGGTGTGAGATCCCTGAGTTCAATCCCTTCAGGAAGTTATATCTGTGAATATATAGGGGAGCTTCTTGAAGAAAAGGAAGCTGAACTAAGGGCAGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTGCAGCAACAGTACTCTCTGGGATGGACTTTCGACTCTCATGCCGGATGCACAGACAAGTTCCTGCGATGTTGTGAAGGATGGTGGTTTTACTATTGATGCTGCTGAGTTTGGCAATATAGGGAGATTCATTAACCATAGTTGCTCACCTAATATAATTGCACAGAACGTCCTTTATGATCACCATGACACCAGAATGCCTCACATAATGTTCTTTGCTGCTGATAACATTCCTCCTTTGCAAGAGCTGACCTACGATTACAATTACCAACTAGATCAAGTCCGCGATTCTGATGGTAATATAAAAAGGAAGTATTGTTACTGTGGTTCTGCTGAATGTACTGGCAGGATGTATTGA 3489 0.4101 MATPENNGHSNEERYGSLMKSGATSPVRPVFKRRKVSATRDFPDGCGPYASRIDEVSNINTAGCGPINGTIVEVKNGEHLAGVKSCTCENDVWQSEVKGFLLMETLGPTADSGLDKDNHMVSSYHVDGSTAKDKPGIVTTRQINDCESTAEDKPGVVTNSQTTDRGLNKESPVDTSHRVDEHITEDEAAKVTLGRTTECSLNQENPVVSSHQVDGSTPEDNPAEVKLGQTGDCSLSLKNREVSSHQVNGCIAEDKLAKVTGERTTDCGLNKENPVVSSRLVDGPTAEDKPAEVPLMDHETLNTEFARTANTGKCDSSYVLESSSPVVEMAVPDDSKHLLSIDNISASSACMVEPITRRYLPQRKVSAVRNFPPLCGRNAPRLGKDKHVCLEGTSSLNNKTEGQQNLAVDDNPLKKVATTDVKEGKSNIQDEYNCKRKLVDIDQLDSERHSAERLKKLRACSPSSEMKKSPEVEREKYASPPETSNHHQIKINSKTVVKEKNRDETKPSSISQSKHKLKGNFNRLQVTSQRKVILGLMTDSECPWRSDKGTSKLKLVAGNSKGKRKKGDSFALPDSSRTEYSGLLNDSEKKPLKKKKGSPASEGMGELVLWEKEDYLNPNENVDPLQIVLRSNEFDVNLTPSSHSNFTGDENDPNVTRKKVRETLRLFQVICRKLLQEVESKLNERANNKRVDLVASKILKEHGKYINTGKQILGCVPGVEVGDEFQYRVELNIVGLHRPIQGGIDYVRHNGKVLATSIVASGGYADDLDNSDVLTYTGQGGNVMNSDKEPEDQKLERGNLALMNSSIEKNPVRVIRGCESVDAKCRTYVYDGLYVVEAGWDEHGPHGKKIFKFRLLREPGQPELPFREVKKSKKFKTREGVCVADISLGKERIPICAVNTIDDDKPPPFNYITSMIYPKFHLLPAEGCDCINGCSDVEKCSCVVKNGGEIPFNHNGAIVQAKPLVYECGPTCKCPSTCYNRVSQLGIKFQLEIFKTQSRGWGVRSLSSIPSGSYICEYIGELLEEKEAELRAGNDEYLFDIGNNCSNSTLWDGLSTLMPDAQTSSCDVVKDGGFTIDAAEFGNIGRFINHSCSPNIIAQNVLYDHHDTRMPHIMFFAADNIPPLQELTYDYNYQLDQVRDSDGNIKRKYCYCGSAECTGRMY 1162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02345 1162 ProSiteProfiles Pre-SET domain profile. 926 986 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun2g02345 1162 MobiDBLite consensus disorder prediction 459 517 - -
Viun2g02345 1162 Gene3D - 697 877 IPR036987 -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 202 223 - -
Viun2g02345 1162 Pfam Pre-SET motif 886 981 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun2g02345 1162 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 291 1162 IPR025794 GO:0016571
Viun2g02345 1162 MobiDBLite consensus disorder prediction 150 179 - -
Viun2g02345 1162 ProSiteProfiles YDG domain profile. 714 857 IPR003105 -
Viun2g02345 1162 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 430 1156 - -
Viun2g02345 1162 SMART G9a_1 709 861 IPR003105 -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 583 600 - -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 202 217 - -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 1 18 - -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 553 601 - -
Viun2g02345 1162 Gene3D SET domain 878 1162 IPR046341 -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 492 511 - -
Viun2g02345 1162 Pfam SAD/SRA domain 713 861 IPR003105 -
Viun2g02345 1162 SUPERFAMILY PUA domain-like 697 870 IPR015947 -
Viun2g02345 1162 ProSiteProfiles Post-SET domain profile. 1146 1162 IPR003616 -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 1 32 - -
Viun2g02345 1162 SUPERFAMILY SET domain 873 1138 IPR046341 -
Viun2g02345 1162 MobiDBLite consensus disorder prediction 153 169 - -
Viun2g02345 1162 ProSiteProfiles SET domain profile. 989 1132 IPR001214 GO:0005515
Viun2g02345 1162 SMART set_7 989 1138 IPR001214 GO:0005515
Viun2g02345 1162 Pfam SET domain 1000 1132 IPR001214 GO:0005515
Viun2g02345 1162 SMART preset_2 883 973 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Viun2g02345 1162 MobiDBLite consensus disorder prediction 459 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02345 Viun-Chr2 30673514 30680459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g02345 654 1159 Su(var)3-9 homologs AT5G04940 41.221 1.51e-119 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun2g02345 SAD_SRA 5.3e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02345 K11420 - vum:124837331 1706.03