Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g02306 | ATGGCGCTTTATCTTTTCTGTACTTTTCTTGTTACCAACTTGATTTTCATGCAAACTCTGGCTGATACTTCGTGCACCGATTGTTTCACTCATTCTCGAGCAGCATATTATCCAAATTCTGAAGAACAAGGAACAGATGCCGGTGCATGCGGGTTTGGTTCCTTTGGTGCCACGATCAATGGCGGGGATGTATCTGCTGCATCTTCTCTTTACCGAAATGGTGTTGGTTGTGGCGCCTGTTACCAGGTGAGGTGTACGAACAGTGGCTATTGCTCAAACAATGGTGTGACTGCAGTCATAACTGACCAAGGTTCAAGTGATAACACAGATTTCATTCTCAGCAAACATGCATTTAGCAGAATGGCTCAAACCACTGATGCAGCTGCTTCTCTACTAGCCATTGGCGTGGTTGATATTGAATATAGACGTGTTTCATGCAGCTACCCAGATAAAAATATAACGATCAAGATAGACGAGAGCAGCAACAACCCTTATTATTTGGCTTTTGTTATTTGGTATCAACAAGGAAGGAGAGACATAACTGCTGTGCAGCTCTGTGAGACTCAAAACTTTGAGTGTAAATTACTTGACCGAAGCCATGGAGCTGTGTGGACTAGTACCTCTCCACCAAGTGGACCTTTGTCTTTGAGAATGTTGTTTAGTGATGAAGAAGAGGGAGAAGAAACTTGGGTTGTTCCAGCAAATAACATACCCGGAGATTGGAAAGCTGGAGAAACATACGATTCAGGGGTACAAGTGAACCAATAG | 768 | 0.4336 | MALYLFCTFLVTNLIFMQTLADTSCTDCFTHSRAAYYPNSEEQGTDAGACGFGSFGATINGGDVSAASSLYRNGVGCGACYQVRCTNSGYCSNNGVTAVITDQGSSDNTDFILSKHAFSRMAQTTDAAASLLAIGVVDIEYRRVSCSYPDKNITIKIDESSNNPYYLAFVIWYQQGRRDITAVQLCETQNFECKLLDRSHGAVWTSTSPPSGPLSLRMLFSDEEEGEETWVVPANNIPGDWKAGETYDSGVQVNQ | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g02306 | 255 | Gene3D | - | 16 | 147 | IPR036908 | - | |
Viun2g02306 | 255 | SUPERFAMILY | Barwin-like endoglucanases | 19 | 150 | IPR036908 | - | |
Viun2g02306 | 255 | Pfam | Expansin C-terminal domain | 153 | 232 | IPR007117 | - | |
Viun2g02306 | 255 | Gene3D | - | 148 | 253 | IPR036749 | - | |
Viun2g02306 | 255 | PRINTS | Expansin/Lol pI family signature | 46 | 64 | IPR007118 | GO:0005576 | |
Viun2g02306 | 255 | PRINTS | Expansin/Lol pI family signature | 235 | 249 | IPR007118 | GO:0005576 | |
Viun2g02306 | 255 | PRINTS | Expansin/Lol pI family signature | 134 | 150 | IPR007118 | GO:0005576 | |
Viun2g02306 | 255 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 47 | 151 | IPR007112 | - | |
Viun2g02306 | 255 | SUPERFAMILY | PHL pollen allergen | 151 | 249 | IPR036749 | - | |
Viun2g02306 | 255 | Pfam | Lytic transglycolase | 67 | 141 | IPR009009 | - | |
Viun2g02306 | 255 | CDD | DPBB_EXLB_N | 30 | 146 | - | - | |
Viun2g02306 | 255 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 165 | 249 | IPR007117 | - | |
Viun2g02306 | 255 | PANTHER | EXPANSIN-B3 | 15 | 252 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g02306 | Viun-Chr2 | 30405652 | 30407223 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g02306 | 11 | 251 | Expansin Gene Family | AT4G17030 | 42.857 | 1.20e-59 | 187 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g02306 | - | - | gmx:100794009 | 489.189 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun2g02306 | 2 | 30405652 | 30407223 | Viun3g04046 | 3 | 48080000 | 48081520 | PCT |